result

Gene information

Detail information of g164202

Location

Gene	Chr	Start	End	Strand
g164202	Scaffold_46087:HRSCAF_429173	1115233	1116807	-

Sequences

CDS

>g164202.t1
ATGATCGATCCATTTCTGTTCAGCTCCGACTCCGAACCTTCATCTGCACCTGAACTCGACAACCTCCTAGCAGGCGCAGGTTACCGCGTCCGGTCTTCCGACCTCCGCCACGTGGCACATTCCCTCGAACTCCTCGATTCCGCCATGCTGGTGCCATCCGACCCTTCCCCTTCGAACGGCGTCCACTACAACCCCTCCGACCTCACCGCCTGGGTCGACTCCATGCTCCAGGACGCCTCCCCCTCCTCCCCTTCGTCATCCTGCCGTCCCTCCTCCACGTGTACGCACCAGATCCATCCACCTTCAAACAACCACTCCAACCTTCTCAACCTCGACAGCGAAGAGGACACCGGCATCCGTCTCATCCACCTCCTCATGACCTGTGCTGACTCCATCCAGCGCAACAATCTGCTCCTCGCTGTCTCCTTAATCGAAGAGACGAAGCTAGTCTTAACCCGCGTCAACGCCGGATTCGCCATCGGCAAGGTCGCCGGATGCTTTCTAGACGCCCTCAGCCGTCGGATCTACAACAGCCCCAATCTAAGCCGTTTCAATTCCTCAACCGAGTTCGAACTGCTCTATCACCACTTCTACGAGGCTTGCCCTTACTTAAAATTCGCACACTTCACCGCGAACCAAGCTATTCTAGAAGCTTTTGAAGGCCAAGACTGCGTCCACGTCATAGATTTCAATCTAATGCATGGACTGCAATGGCCGGCCCTAATTCAAGCCCTAGCCATACGGCCTGGCAGGCCGCCGTTTTTGAGAATAACGGGTATTGGGCCACCCTCGCCCGATGGGCGCGATTCGCTCCGCGAAGTCGGGTTAAGGCTGGCCGAGCTGGCTCGGTCACTAAACGTCCGTTTTGCCTTTAGAGGAGTTGCAGCAAACCGATTAGACGATGTGAAGCCTTGGATGTTACAGGTGGCGGCTGGAGAGGCCGTGGCAGTTAATTCAGTCATGCAGCTGCATAAGCTGGTAGGCGATTCGGGTTCGGGTTTTCCAGACCCGATAGATACGGTTCTGCACTGGATAGTTGGCTTGAAACCCAAAATCGTGACCGTCGTGGAGCAGGAGGCGGACCATAACAAACCAGTTTTCTTGGACCGGTTCACGGAGGCGTTGTTTTATTACTCCACGGTGTTCGATTCGTTAGAAGTGAATAGATGTCAGCAAAGCAACCAATTAGCAGAACTGTACCTGCAGAGGGAGATATGCAACATAGTGTGCTACGAAGGGGTGGAAAGAGTAGAGAGGCATGAGCCGCTGATGAAGTGGAGGGTGAGATTGGGCCGGGCCGGGTTGGAGCCGGTCCATCTGGGTTCGAATGCGTATAAGCAAGCAAGCATGCTTCTGACGTTGTACTCAGGAGAAGGGTACGGGGTGGACGAAGTAGACGGGTGTTTGATGCTTGGGTGGCATAGTCGGGCTCTGATATCAGCGTCGGCATGGCGGGTCCATGAGGATGACGTGGCGGGTGGGAGTTGTTTTGGGAATGGGAGTGAGAATAACATTAATGGGAGTAGCAGTAGCAGCGGGTGCAATAATAGTAGCAATGTCAGTAACCTGCTGTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916867.1	8.1e-178	DELLA protein GAI
Swissprot	A0A396IUP1.1	1.2e-122	DELLA protein 1
trEMBL	A0A6I9QXC5	5.8e-178	DELLA protein GAI

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G14920.1	47.96	2e-125	446	GAI;RGA2	GRAS family transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g164202	AT1G14920.1	515	210	12	19	486	27	530	47.96	2e-125	446
g164202	AT1G66350.1	494	219	10	16	487	28	508	48.58	3e-119	425
g164202	AT3G03450.1	511	219	13	22	486	46	546	46.18	2e-116	416

Ortholog group

Species	Genes
Allium cepa	g164202.t1
Allium fistulosum	AfisC5G04981
Allium sativum	Asa6G05069.1; Asa6G07138.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g45860.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12041.5	DELLA	Domain	20	81	73.6	7.7e-21
PF03514.11	GRAS	Family	121	485	418.8	1.6e-125

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14494	DELLA; DELLA protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network