Detail information of g164770


Location
GeneChrStartEndStrand
g164770Scaffold_46175:HRSCAF_429261463605475760+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020269842.14.0e-133protein STRUBBELIG-RECEPTOR FAMILY 5-like
SwissprotQ6R2K1.12.0e-105Leucine-rich repeat receptor kinase-like protein SRF5
trEMBLA0A5P1FMA52.9e-133Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G78980.149.591e-165 580SRF5STRUBBELIG-receptor family 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag164770.t1
Allium fistulosumAfisC1G06986; AfisC4G05953
Allium sativumAsa5G05006.1
Arabidopsis thalianaAT1G78980.1
Oryza sativaLOC_Os09g38700.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13855.3LRR_8Repeat349134.71e-08
PF00069.22PkinaseDomain290554131.62.9e-38

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0016020Cmembrane
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004675Ftransmembrane receptor protein serine/threonine kinase activity
GO:0004888Ftransmembrane signaling receptor activity
GO:0007165Psignal transduction
GO:0007178Ptransmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623Ccell
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0007154Pcell communication
GO:0007166Pcell surface receptor signaling pathway
GO:0007167Penzyme linked receptor protein signaling pathway
GO:0008150Pbiological_process
GO:0009987Pcellular process
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019199Ftransmembrane receptor protein kinase activity
GO:0019538Pprotein metabolic process
GO:0023052Psignaling
GO:0036211Pprotein modification process
GO:0038023Fsignaling receptor activity
GO:0043170Pmacromolecule metabolic process
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051716Pcellular response to stimulus
GO:0060089Fmolecular transducer activity
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.