Detail information of g167516


Location
GeneChrStartEndStrand
g167516Scaffold_46621:HRSCAF_4297075351673671+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020272457.10.0e+00SCY1-like protein 2 isoform X1
SwissprotQ55BQ3.15.9e-45SCY1-like protein kinase 2
trEMBLA0A4S8JMS30.0e+00Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G22870.160.260.01088Protein kinase family protein with ARM repeat domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag167516.t1
Allium fistulosumAfisC5G01177
Allium sativumAsa6G06209.1
Arabidopsis thalianaAT1G22870.1; AT1G71410.1
Oryza sativaLOC_Os01g42950.1; LOC_Os01g42950.2; LOC_Os01g42950.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain10234276.71.6e-21

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008152Pmetabolic process
GO:0002090Pregulation of receptor internalization
GO:0002092Ppositive regulation of receptor internalization
GO:0007267Pcell-cell signaling
GO:0003674Fmolecular_function
GO:0016192Pvesicle-mediated transport
GO:0005102Freceptor binding
GO:0016055PWnt signaling pathway
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0006810Ptransport
GO:0006897Pendocytosis
GO:0006898Preceptor-mediated endocytosis
GO:0007034Pvacuolar transport
GO:0007041Plysosomal transport
GO:0007154Pcell communication
GO:0007166Pcell surface receptor signaling pathway
GO:0008150Pbiological_process
GO:0008333Pendosome to lysosome transport
GO:0009893Ppositive regulation of metabolic process
GO:0009966Pregulation of signal transduction
GO:0009968Pnegative regulation of signal transduction
GO:0009987Pcellular process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010646Pregulation of cell communication
GO:0010648Pnegative regulation of cell communication
GO:0019222Pregulation of metabolic process
GO:0023052Psignaling
GO:0023051Pregulation of signaling
GO:0023057Pnegative regulation of signaling
GO:0030100Pregulation of endocytosis
GO:0030111Pregulation of Wnt signaling pathway
GO:0030178Pnegative regulation of Wnt signaling pathway
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031623Preceptor internalization
GO:0032879Pregulation of localization
GO:0043112Preceptor metabolic process
GO:0043170Pmacromolecule metabolic process
GO:0044237Pcellular metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0045807Ppositive regulation of endocytosis
GO:0046907Pintracellular transport
GO:0048259Pregulation of receptor-mediated endocytosis
GO:0048260Ppositive regulation of receptor-mediated endocytosis
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048523Pnegative regulation of cellular process
GO:0048583Pregulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051049Pregulation of transport
GO:0051050Ppositive regulation of transport
GO:0051128Pregulation of cellular component organization
GO:0051130Ppositive regulation of cellular component organization
GO:0051179Plocalization
GO:0051234Pestablishment of localization
GO:0051641Pcellular localization
GO:0051649Pestablishment of localization in cell
GO:0051716Pcellular response to stimulus
GO:0060070Pcanonical Wnt signaling pathway
GO:0060255Pregulation of macromolecule metabolic process
GO:0060627Pregulation of vesicle-mediated transport
GO:0060828Pregulation of canonical Wnt signaling pathway
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0090090Pnegative regulation of canonical Wnt signaling pathway
GO:0098657Pimport into cell
GO:0198738Pcell-cell signaling by wnt
GO:1905114Pcell surface receptor signaling pathway involved in cell-cell signaling
GO:2000286Preceptor internalization involved in canonical Wnt signaling pathway
GO:2000369Pregulation of clathrin-mediated endocytosis
GO:2000370Ppositive regulation of clathrin-mediated endocytosis

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17541SCYL2; SCY1-like protein 2EC:- --
K20177VPS3, TGFBRAP1; vacuolar protein sorting-associated protein 3EC:- Autophagy - yeastko04138

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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