result

Gene information

Detail information of g171378


Location
GeneChrStartEndStrand
g171378CHR8136608536136611767+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF6142667.11.1e-63hypothetical protein GIB67_015153
SwissprotQ6X5Y6.13.1e-60Protein WRINKLED 1
trEMBLA0A7J7LJ547.7e-64AP2-like factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G54320.158.162e-57 220ASML1;ATWRI1;WRI;WRI1Integrase-type DNA-binding superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag171324.t1; g171378.t1
Allium fistulosumAfisC8G01530; AfisC8G01533; AfisC8G01538
Allium sativumAsa1G03566.1; Asa3G01401.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g59780.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain6712222.87.4e-05
PF00847.17AP2Domain16521644.89.9e-12

Gene Ontology
AccessionOntologyName
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0006109Pregulation of carbohydrate metabolic process
GO:0006110Pregulation of glycolytic process
GO:0006140Pregulation of nucleotide metabolic process
GO:0006355Pregulation of transcription, DNA-templated
GO:0006629Plipid metabolic process
GO:0006638Pneutral lipid metabolic process
GO:0006639Pacylglycerol metabolic process
GO:0006641Ptriglyceride metabolic process
GO:0008150Pbiological_process
GO:0008610Plipid biosynthetic process
GO:0009058Pbiosynthetic process
GO:0009743Presponse to carbohydrate
GO:0009744Presponse to sucrose
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009894Pregulation of catabolic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019220Pregulation of phosphate metabolic process
GO:0019222Pregulation of metabolic process
GO:0019432Ptriglyceride biosynthetic process
GO:0051196Pregulation of coenzyme metabolic process
GO:0030808Pregulation of nucleotide biosynthetic process
GO:0030811Pregulation of nucleotide catabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031329Pregulation of cellular catabolic process
GO:0034285Presponse to disaccharide
GO:0042221Presponse to chemical
GO:0042325Pregulation of phosphorylation
GO:0043467Pregulation of generation of precursor metabolites and energy
GO:0043470Pregulation of carbohydrate catabolic process
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044249Pcellular biosynthetic process
GO:0044255Pcellular lipid metabolic process
GO:0045017Pglycerolipid biosynthetic process
GO:0046460Pneutral lipid biosynthetic process
GO:0046463Pacylglycerol biosynthetic process
GO:0046486Pglycerolipid metabolic process
GO:0048518Ppositive regulation of biological process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051174Pregulation of phosphorus metabolic process
GO:0051193Pregulation of cofactor metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1900371Pregulation of purine nucleotide biosynthetic process
GO:1900542Pregulation of purine nucleotide metabolic process
GO:1901363Fheterocyclic compound binding
GO:1901576Porganic substance biosynthetic process
GO:1901700Presponse to oxygen-containing compound
GO:1901957Pregulation of cutin biosynthetic process
GO:1901959Ppositive regulation of cutin biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903578Pregulation of ATP metabolic process
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:2001169Pregulation of ATP biosynthetic process
GO:0062012
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09285OVM, ANT; AP2-like factor, ANT lineageEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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