result

Gene information

Detail information of g173414


Location
GeneChrStartEndStrand
g173414Scaffold_47323:HRSCAF_4304095054697844+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRRT47052.18.1e-43hypothetical protein B296_00048038
SwissprotQ9SJN0.11.2e-30bZIP transcription factor 39
trEMBLA0A426Y5L85.8e-43BZIP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G36270.136.267e-33 138ABI5;AtABI5;GIA1Basic-leucine zipper (bZIP) transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag173414.t1
Allium fistulosumAfisC8G03679
Allium sativumAsa1G01577.1
Arabidopsis thalianaAT2G36270.1; AT3G44460.1
Oryza sativaLOC_Os01g64000.1; LOC_Os01g64000.2; LOC_Os01g64000.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0007154Pcell communication
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0009266Presponse to temperature stimulus
GO:0042493Presponse to drug
GO:0009409Presponse to cold
GO:0009414Presponse to water deprivation
GO:0009415Presponse to water
GO:0009555Ppollen development
GO:0009628Presponse to abiotic stimulus
GO:0009651Presponse to salt stress
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009739Presponse to gibberellin
GO:0009743Presponse to carbohydrate
GO:0009755Phormone-mediated signaling pathway
GO:0009756Pcarbohydrate mediated signaling
GO:0009791Ppost-embryonic development
GO:0009845Pseed germination
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010029Pregulation of seed germination
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010152Ppollen maturation
GO:0010154Pfruit development
GO:0010182Psugar mediated signaling pathway
GO:0010187Pnegative regulation of seed germination
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0021700Pdevelopmental maturation
GO:0022414Preproductive process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0042221Presponse to chemical
GO:0042803Fprotein homodimerization activity
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048229Pgametophyte development
GO:0048316Pseed development
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048580Pregulation of post-embryonic development
GO:0048581Pnegative regulation of post-embryonic development
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051093Pnegative regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051241Pnegative regulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071322Pcellular response to carbohydrate stimulus
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:0090351Pseedling development
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:1900140Pregulation of seedling development
GO:1901363Fheterocyclic compound binding
GO:1901698Presponse to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000026Pregulation of multicellular organismal development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14432ABF; ABA responsive element binding factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.