result

Gene information

Detail information of g175569

Location

Gene	Chr	Start	End	Strand
g175569	Scaffold_47609:HRSCAF_430695	301004	303695	-

Sequences

CDS

>g175569.t1
ATGCTAGTATTTAAGAAGGCTTACCTTCCTCCCCCACAGTTAGAACTGTGTGACAACAGTCTGGCACTCTTAAATGCCTCTGATCATCTCCACCTCCTTTCTATAAATCCTCATCACTCTCTTATTCTTCTCTCACAAATCAATCTTCTAATTTTTTTCCCCTTTTTAAAAATGGATATTCCAATGATACTCGTCTCCATAGCCATCCTAGCTTCCTACATTTTATGGTTCACCAACCTAATCCCGAAAATGAACGGGCCTAGAGTTTGGCCCGTTCTTGGAAGCCTGCCCGGCCTGGTCCAAAACGTGCACCGCATGCATGACTGGATTCTGGAAAACCTAGAAGCAACACGTGGCACATATCAAACGTGCATATGCGCCGTCCCGTTCCTAGCACGGAGGCAAGGGCTCGTAACTGTCACATGCGACCCCCGTAATTTGGAACACATTCTCAAAACCAAGTTCGACAACTACCCTAAGGGCCCCACATGGCAGGCTGTCTTTCACGAGCTTCTCGGAGACGGCATCTTCAACTCGGACGGCGACACCTGGCTCTTTCAGAGGAAAACCGCGGCCCTCGAGTTCACCACACGTACCTTGCGCATAGGCATGGCACGTTGGGTTTCCAGGTCTGTCACGGAGAGATTTCTTCCGATTTTGCAGAGTGCTTCAGAGGCTAAAACGAGTGTTGATCTTCAAGATTTGCTGCTTAGGCTGACTTTTGATAATATATGTGGATTGGCATTTGGGAAAGATCCGGAAACTCTGTCCCCGGATCTTCCGGATAATGCGTTTTCATTGGCTTTCGATAGAGCGACTGAAGCGAGTTTGAATAGATTCATTTTTCCAGAAGTTGTGTGGAGGTTTAAGAAGTGGTTAGGTCTTGGAATGGAGACTACATTGTCTGATTCAGTAGCTCACGTGGATAAATATCTTTCTGCCATTATAAAGTCTAGAAAACTCGAGCTAGATGTGAACCCTGACTCGAATCAGGACAACGATAACTTACTATCAAGGTTTATACGCAAAGGAAGCTATTCAGATAAGTTTTTACAAAATGTTGCATTGAATTTCATATTAGCTGGGCGTGATACTTCTTCAGTTGCTCTTTCCTGGTTCTTCTGGCTAGTATTGAACAATCCTATAATCGAGAAGAAAATCATAGCAGAAATATGCTACGTCTTATCAACCACGAGAGGTGATAAAAACCCGAAGAATTGGGTGAATTCGCCTCTTGCATTCGAAGAAGTTGATCAACTGATATACCTGAAAGCAGCACTGACTGAAACGTTACGATTATACCCTTCTGTTCCGGAAGATTCTAAGCATGTCGTTTCAGATGATGTTTTGCCAGATGGCACATTTGTGCCAGCCGGCTCGGCTGTAACGTACTCGATTTATTCAGCTGGTAGGTTAAAATCTACCTGGGGTGAGGATGCATTGGAATTTAAACCTGAAAGATGGCTAAGTTCAGATGGAACCAAATTCAAACCACAAGACCCATTCAAATTTGTCGCGTTTAATGGAGGACCAAGAATTTGTTTAGGGAAAGATTTGGCTTATCTGCAAATGAAGTCTATAGCGGCGTCGTTGCTTCTGAGGTATAAGTTGAGGGTTGCTGAAGGACATAAGGTAGAGCAAAAGATGTCATTGACATTGTTCATGAAGCATGGATTGAATGTTAATGTGCTACAAAGAGACATTAGTGAGCTTGCTGGGATTAATGGTAAATAA

Protein

Gene

>g175569.t1
ATGCTAGTATTTAAGAAGGCTTACCTTCCTCCCCCACAGTTAGGTGCTCTTCTGGCTTTGTTTTACTAATATCCATCATCCTCCACGGAAAGCCAGATTTCTTCCCATTAAATCTCTAAGCTAGGATCACAAGTCTGATTTAGTTCTTTTTTCATATACGGGGAGAAAAGGTAAACATATAAATTGATGTCAACCAACCCTGACAGCATTAAATGCCAAAGTTTTTTCTTCACCATAAGAACTGTGTGACAACAGTCTGGCACTCTTAAATGCCTCTGATCATCTCCACCTCCTTTCTATAAATCCTCATCACTCTCTTATTCTTCTCTCACAAATCAATCTTCTAATTTTTTTCCCCTTTTTAAAAATGGATATTCCAATGATACTCGTCTCCATAGCCATCCTAGCTTCCTACATTTTATGGTTCACCAACCTAATCCCGAAAATGAACGGGCCTAGAGTTTGGCCCGTTCTTGGAAGCCTGCCCGGCCTGGTCCAAAACGTGCACCGCATGCATGACTGGATTCTGGAAAACCTAGAAGCAACACGTGGCACATATCAAACGTGCATATGCGCCGTCCCGTTCCTAGCACGGAGGCAAGGGCTCGTAACTGTCACATGCGACCCCCGTAATTTGGAACACATTCTCAAAACCAAGTTCGACAACTACCCTAAGGGCCCCACATGGCAGGCTGTCTTTCACGAGCTTCTCGGAGACGGCATCTTCAACTCGGACGGCGACACCTGGCTCTTTCAGAGGAAAACCGCGGCCCTCGAGTTCACCACACGTACCTTGCGCATAGGCATGGCACGTTGGGTTTCCAGGTAAATTATAGGGTTTGCAACATGAATTTTAGTTTTTCATAAGTTTATGCTTTACTTATATAGTGTATATTATATGTGTGTATGTATATCATCTTATTGAGTTTCCACGTCCGTTCTCATCATTACCATCATCCAAGCATTAATCCTAAATTGCTAGGGTAGGATAAATAAATTTTCATTTTCAATAAATTTCTATTTTGAATCATATCAAATTAACAGAAAATTATATTTGTAACAAAAATATTACTTATTCATTAAATTTTACCATTGTACAAAATTAGCCTTGTTTCTTAATAATATTAGTACTAAAAATGCAAAATCATCACACAGAAATAAAATAAAGGACCTTCATTAACAAGATAAAACATGATGACTACAACAATATTCTTGACCTATGTCAGTTTATTGATTGTTAGTGCCTAACATGTTAAAAAAGGTTCATTTATAGATGAAATTAATATTACTACCATGAGAACTCGTGTTTTTTCAAATGATTTCCAAGGGAATCAGAGAGAAGCTGGAGTTAGCTAAATTTCACATTGATTTTGTTAAATTTCAATTCAATTTGGTGCAGGAAAAGTTTAGGATATTTGTATGTTTGAAGTTTGAAAAATAGAGATGAATTTTAGAGTAATATTATAAAATTTTGGTGTACATTAGTTTTGCAAGTTTATTGGTGTATGTTGAGTATGCTTTGGTCTTTAAGTAGAATTTGCCAAAGTTAGATTAAATTATATTTTCTGAGGATAATGTTTTATGCAGGTCTGTCACGGAGAGATTTCTTCCGATTTTGCAGAGTGCTTCAGAGGCTAAAACGAGTGTTGATCTTCAAGATTTGCTGCTTAGGCTGACTTTTGATAATATATGTGGATTGGCATTTGGGAAAGATCCGGAAACTCTGTCCCCGGATCTTCCGGATAATGCGTTTTCATTGGCTTTCGATAGAGCGACTGAAGCGAGTTTGAATAGATTCATTTTTCCAGAAGTTGTGTGGAGGTTTAAGAAGTGGTTAGGTCTTGGAATGGAGACTACATTGTCTGATTCAGTAGCTCACGTGGATAAATATCTTTCTGCCATTATAAAGTCTAGAAAACTCGAGCTAGATGTGAACCCTGACTCGAATCAGGACAACGATAACTTACTATCAAGGTTTATACGCAAAGGAAGCTATTCAGATAAGTTTTTACAAAATGTTGCATTGAATTTCATATTAGCTGGGCGTGATACTTCTTCAGTTGCTCTTTCCTGGTTCTTCTGGCTAGTATTGAACAATCCTATAATCGAGAAGAAAATCATAGCAGAAATATGCTACGTCTTATCAACCACGAGAGGTGATAAAAACCCGAAGAATTGGGTGAATTCGCCTCTTGCATTCGAAGAAGTTGATCAACTGATATACCTGAAAGCAGCACTGACTGAAACGTTACGATTATACCCTTCTGTTCCGGAAGATTCTAAGCATGTCGTTTCAGATGATGTTTTGCCAGATGGCACATTTGTGCCAGCCGGCTCGGCTGTAACGTACTCGATTTATTCAGCTGGTAGGTTAAAATCTACCTGGGGTGAGGATGCATTGGAATTTAAACCTGAAAGATGGCTAAGTTCAGATGGAACCAAATTCAAACCACAAGACCCATTCAAATTTGTCGCGTTTAATGGAGGACCAAGAATTTGTTTAGGGAAAGATTTGGCTTATCTGCAAATGAAGTCTATAGCGGCGTCGTTGCTTCTGAGGTATAAGTTGAGGGTTGCTGAAGGACATAAGGTAGAGCAAAAGATGTCATTGACATTGTTCATGAAGCATGGATTGAATGTTAATGTGCTACAAAGAGACATTAGTGAGCTTGCTGGGATTAATGGTAAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008804035.1	1.8e-223	cytochrome P450 86A8-like
Swissprot	B3RFJ6.1	1.4e-215	Long-chain acyl-CoA omega-monooxygenase
trEMBL	A0A8B7CRH4	2.7e-224	cytochrome P450 86A8-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G45970.1	69.31	0.0	756	CYP86A8;LCR	cytochrome P450, family 86, subfamily A, polypeptide 8

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g175569	AT2G45970.1	518	156	3	58	573	1	517	69.31	756
g175569	AT4G00360.1	515	155	3	58	569	1	514	69.13	748
g175569	AT1G01600.1	516	164	2	58	569	1	516	67.44	734

Ortholog group

Species	Genes
Allium cepa	g175569.t1; g48934.t1
Allium fistulosum	AfisC1G04397; AfisC1G07918
Allium sativum	Asa7G00307.1; Asa7G04510.1
Arabidopsis thaliana	AT4G00360.1
Oryza sativa	LOC_Os02g44654.1; LOC_Os02g44654.2; LOC_Os04g47250.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	86	557	215.6	9.9e-64

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0006082	P	organic acid metabolic process
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006631	P	fatty acid metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016713	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0019752	P	carboxylic acid metabolic process
GO:0032787	P	monocarboxylic acid metabolic process
GO:0043436	P	oxoacid metabolic process
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044255	P	cellular lipid metabolic process
GO:0044281	P	small molecule metabolic process
GO:0071704	P	organic substance metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15398	CYP86A4S; fatty acid omega-hydroxylase	EC:1.14.-.-	Cutin, suberine and wax biosynthesis	ko00073
K20544	CYP86A22; long-chain acyl-CoA omega-monooxygenase	EC:1.14.14.129	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network