Detail information of g175974


Location
GeneChrStartEndStrand
g175974Scaffold_47659:HRSCAF_430745278755289392+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256714.10.0e+00switch 2
SwissprotF4I2H2.13.7e-286Protein CHROMATIN REMODELING 9
trEMBLA0A5P1F9350.0e+00Switch 2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G03750.160.290.01035CHR9switch 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag175974.t1
Allium fistulosumAfisC1G05696
Allium sativumAsa7G03734.1
Arabidopsis thalianaAT1G03750.1
Oryza sativaLOC_Os05g15890.1; LOC_Os05g15890.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily154383161.32.2e-47
PF00271.28Helicase_CFamily50862063.61.7e-17

Gene Ontology
AccessionOntologyName
GO:0005575Ccellular_component
GO:0016020Cmembrane

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K20098ERCC6L2; DNA excision repair protein ERCC-6-like 2EC:3.6.4.- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.