result

Gene information

Detail information of g178580

Location

Gene	Chr	Start	End	Strand
g178580	Scaffold_47990:HRSCAF_431076	49366	52817	+

Sequences

CDS

>g178580.t1
ATGACGCGTAGCTATACAACATCCACGGAAAAGACTAGTTCTCATACGCCACCAACAACGGAACCACTCTACAAATTACATGTTTTGACATTGTTTCAGCTGTTAGCTGTTGTAACTTCAACTTCAGCAGCATCAACAGCTTCGGAAAACTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTTCAAATCAACTGCAATGAAAAAACCGGTACAGCAACCACAGTTGATGGTGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAATCCCATCGGTTTTTCTTGCAATTATCCGAAAGGAGAAAACATAAGCTACCTCAGTTTTCTGAGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCTGATCCTTATACTCAAAGCAACCATTTTACAGATAATTCTGATATATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATAATTCACAATGTTCAGGAGTAGGATGTTGCCAAGCAATTTTACCAGAAGGACACTCGGGTCCTATAGCTTTCTCAACCGACAACGAACGCGGCAATTTGGTCAGACGATATGAGCAGGCTCCTGTGGTGCTAGATTGGGGTTGTAGAAACAAGACTTGTAAAGAAACAAAATTGAACAATTGTAGTCAAGGTTATGAAGCAATCCTTATATCCACGGTGGATGCACAGATATCGATGAATTGCCAAAATAGCACACTGAATCGATGTCATGGAGACTGTACTAACCTACCAGGCAACTATAGTTGTACATGCCCAGTTGGATATGCAGGCTCCGCTATAATACAATTTGGTTGCAGAAAGAATTCAACAACTCCAATATTTTGTCATATACCGATAGCATGTCTCTTTACATTGCTTGTCGCTGTTATCATGTATTTAATACATGGAAAAAGAAAACTAAACAGGGCAAGGGAGAAGTGTTTCAGACAAAATAGAAGATTGTTACTTCAAGCACAGATTAATGCACATCAATCTGTTCGGTTCAGGATATTTTCCATAAAAGACATCCTAAAAGCAACAAACAATTTCGATGAAGGTAGAATTAAAGGACGTGGAGGTCAGGGCATAGTCTATGAAGGAACCATTGACTGCAGACATGTAGCTATAAAAAAGGCTATCATGATCAATGAAAAGAGGATGGAATTCGTTAAAGAAATGCATATATTATCTCTCATTAACCATAAAAACGTAGTCCAAATTCTGGGGTGTTGTTTGGAAGTTGAGGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGGGGGACACTATACCAACGTGTCCAAGAGAAGAATCAAAGCATGTCACTGGGACATCGCCTTCAGATTGCTATTGATACTGCTTCCGCTCTCACTTATTTACATTATGATTCTTTGCCTCCAATTATTCATGGAGACGTTAAATCTTCAAACATACTTCTGGACGAGAATAATATTGCAAAAATATCAGATTTTGGAGCTTCAATGTTACCCCTAACGGAAATAAATGAAACAGGCGTACCCGGCACTTATGGTTACTTAGATCCAGAGAGTTTATTAACAGGTCACCTGACCAAAAAGAGCGATGTTTATAGTTTTGCAGTTGTCTTTCTGGAGCTGTTAACTGGAATGAAAGCAGTGTATTTTGATGAGTCTAGAGAGAAAAGAACCCTTGCGGCAACATTCAAACAAGAAGCATGTGATGACAAAAGAACAGATAACAGAATTTTCAGAGCTTTTGAACAATGCCTGGAGGAAAATGGGAGTGAAAGACCAACAATAAAAAAGGTCTTGGCCTGGCTTCGAAAGATACAAGAATTTGATCCAAAATTATCCGAAGAAAGTGAATATGACCCAGAACCAGTGTATGCTGAATCATGTAATCATGGCCCAAATACAACTCAAATTTTCAGTTCAGAGCATCGAGTAGTAGTGTTCGAATTGGATTGCCCTCTCACAAGATAG

Protein

Gene

>g178580.t1
ATGACGCGTAGCTATACAACATCCACGGAAAAGACTAGTGTAAATAAAAAAATGCAATCAAGCAACGACTCAAGTTAGTCTAGATGTAAGCAGTTCTCCAGCTTTTATTTGAAGCCATATAATATGCCTTTGATCAATTTCTGTAGGCCAGTCCTTATGTTAGTTTCTGAATTAACGAGTAAAGAAAAAAACGTTTCAGCGACTGCTCTTACTAATAACTTGTAATTTTCAAACTTGTATGCCTACTTCAGTTAAAAGATATTCCGGTCCACAAAATTTGTTCAGGTGTATTTATACACACACAATATCTTCGATTCTTTTTATCAGTCTCATACGCCACCAACAACGGAACCACTCTACAAATTACATGTTTTGACATTGTTTCAGCTGTTAGCTGTTGTAACTTCAACTTCAGCAGCATCAACAGCTTCGGAAAACTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTTCAAATCAACTGCAATGAAAAAACCGGTACAGCAACCACAGTTGATGGTGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAATCCCATCGGTTTTTCTTGCAATTATCCGAAAGGAGAAAACATAAGCTACCTCAGTTTTCTGAGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCTGATCCTTATACTCAAAGCAACCATTTTACAGATAATTCTGATATATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATAATTCACAATGTTCAGGAGTAGGATGTTGCCAAGCAATTTTACCAGAAGGACACTCGTATTATGAAATAAGATTCAATTCTGAATTTTCTCAATAAGCTATCTGGGACTACAGTCCTTGCAGTTATGCATTTCTAGCAGAAAAGGGGTCCTATAGCTTTCTCAACCGACAACGAACGCGGCAATTTGGTCAGACGATATGAGCAGGCTCCTGTGGTGCTAGATTGGGGTTGTAGAAACAAGACTTGTAAAGAAACAAAATTGAACAAGTCAGAGAACTATGCATGCGTTAGTTCTAATAGTTTTGTAATGACTCTAAGTTTGGTTATACTGCAGTTGTAGTCAAGGTTATGAAGCAATCCTTATATCCACGGTGGATGCACAGGTATACTAATTATATGATCTCTTTGTAATTTGTATGTGGAATCAAAATGAAAATGTTTGTGTTTTGCTGCGGCCAGATATCGATGAATTGCCAAAATAGCACACTGAATCGATGTCATGGAGACTGTACTAACCTACCAGGCAACTATAGTTGTACATGCCCAGTTGGATATGCAGGCTCCGCTATAATACAATTTGGTTGCAGAAAGAATTCAACAACTCCAATATTTTGTCATATACCGATAGGTAAATAGTAACTACTAAAGTATCTCACTGCATTTAAGTTTATTACCGTTCTTAAATCTCAAAGCTTAAAGGTTTATCCTCTCTTCCATTTAGTGTTAAGGTAGTCTTAGAGATATTTGGAAAGAAATAATCAAATAACTTCAAATATGTTTTACCTGAAATGAGATAATCATTGTATTACGCTGACTGGAAAACAGTTCATCCTTTCTTTATCAACTGTGTAGCAGTACAATTTGTGGATAGATATATCATATACTGAACTAGAAATACAATTTAAATTTCAGCTAACGACCAAGGTGACAATGGTAAGACATTTTGTTATGTTTGAATTCGATTAACTTAATTAGCATCCCAGACATTTGGTCTCAACCGTTGAGTAAAAACTAAAAAGATTAGATAAGTGTATGTGTGTACAATTAATATGACGAAAAAGATGCACAGCAATGTGAAGAGTTTAATTACGTGGACATGTAACTAAAGTAAGGCTGCGTATAATAATTTTGCACTTACCTGGTGTTTCGAATATCTCGGAAATAAGATTGCTATATATAGAGTTATTATTGCATACCTGTTAGATAGCAATCAAGTATGAATAGTCATATTGGTACCCATTTTGGAATGCATTTTTAAGCATATATATATAACTGTAAATTAGTAAAAGAAAAAAAGCGTGAGAAGACCCATGACTATAACAATATTGAATTCGATCAGAATAAGCATGAACAGAGGTTACAACCACTATAAAGGGACATGTTACATTATTCCTTATAGTAAAGGTAGTTCTACATGTAATCTTTATGCTACTCGTTTATGACAGTAAACTACTAATCCCATATGCAGCATGTCTCTTTACATTGCTTGTCGCTGTTATCATGTATTTAATACATGGAAAAAGAAAACTAAACAGGGCAAGGGAGAAGTGTTTCAGACAAAATAGAAGATTGTTACTTCAAGCACAGATTAATGCACATCAATCTGTTCGGTTCAGGATATTTTCCATAAAAGACATCCTAAAAGCAACAAACAATTTCGATGAAGGTAGAATTAAAGGACGTGGAGGTCAGGGCATAGTCTATGAAGGAACCATTGACTGCAGACATGTAGCTATAAAAAAGGCTATCATGATCAATGAAAAGAGGATGGAATTCGTTAAAGAAATGCATATATTATCTCTCATTAACCATAAAAACGTAGTCCAAATTCTGGGGTGTTGTTTGGAAGTTGAGGTTCCCATCTTGGTTTATGAGTTCGTCTCTGGGGGGACACTATACCAACGTGTCCAAGAGAAGAATCAAAGCATGTCACTGGGACATCGCCTTCAGATTGCTATTGATACTGCTTCCGCTCTCACTTATTTACATTATGATTCTTTGCCTCCAATTATTCATGGAGACGTTAAATCTTCAAACATACTTCTGGACGAGAATAATATTGCAAAAATATCAGATTTTGGAGCTTCAATGTTACCCCTAACGGAAATAAATGAAACAGGCGTACCCGGCACTTATGGTTACTTAGATCCAGAGAGTTTATTAACAGGTCACCTGACCAAAAAGAGCGATGTTTATAGTTTTGCAGTTGTCTTTCTGGAGCTGTTAACTGGAATGAAAGCAGTGTATTTTGATGAGTCTAGAGAGAAAAGAACCCTTGCGGCAACATTCAAACAAGAAGGTCTGCAAGGGATTTTGGATGATGAAATCAAGCATGTGATGACAAAAGAACAGATAACAGAATTTTCAGAGCTTTTGAACAATGCCTGGAGGAAAATGGGAGTGAAAGACCAACAATAAAAAAGGTCTTGGCCTGGCTTCGAAAGATACAAGAATTTGATCCAAAATTATCCGAAGAAAGTGAATATGACCCAGAACCAGTGTATGCTGAATCATGTAATCATGGCCCAAATACAACTCAAATTTTCAGTTCAGAGCATCGAGTAGTAGTGTTCGAATTGGATTGCCCTCTCACAAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009387366.1	1.9e-118	PREDICTED: wall-associated receptor kinase 2-like isoform X1
Swissprot	Q9LMP1.1	7.9e-85	Wall-associated receptor kinase 2
trEMBL	A0A804HY64	1.4e-118	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	33.72	4e-86	316	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g178580	AT1G21270.1	682	353	20	49	649	27	690	33.72	4e-86	316
g178580	AT1G21240.1	718	362	24	29	652	9	704	33.43	7e-85	311
g178580	AT1G21250.1	710	375	22	26	652	7	698	32.96	5e-82	302

Ortholog group

Species	Genes
Allium cepa	g178580.t1; g220669.t1; g89047.t1; g89061.t1; g89069.t1; g89081.t1; g91805.t1
Allium fistulosum	AfisC1G08189; AfisC1G08192; AfisC1G08200; AfisC1G08207; AfisC1G08218; AfisC1G08220; AfisC1G08518; AfisC1G08519; AfisC2G04509; AfisC3G02334; AfisC3G06813; AfisS72G00002
Allium sativum	Asa0G01845.1; Asa0G02849.1; Asa0G04439.1; Asa1G01131.1; Asa4G00840.1; Asa7G06588.1; Asa7G06608.1; Asa7G06609.1; Asa7G06610.1; Asa7G06611.1; Asa7G06618.1; Asa7G06623.1; Asa7G06629.1; Asa7G06631.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g30110.1; LOC_Os04g30340.1; LOC_Os04g55750.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	49	151	87.7	7.3e-25
PF07714.14	Pkinase_Tyr	Domain	391	630	143.5	6.2e-42

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network