result

Gene information

Detail information of g179267

Location

Gene	Chr	Start	End	Strand
g179267	Scaffold_48059:HRSCAF_431145	57986	62876	-

Sequences

CDS

>g179267.t1
ATGCGGAAAAGTATTCAAGACTTGTTCAACTTACTGCAAAGGGAACCGCCCATGTTTGGCATCTTGTTGAAAGGGCACGGAAAGAGTTATTACATTTATATTCGTACTGATCCAACTTCATTCACTACAAGAAAAACACCTTTGACAGCAACTATTCTCAGCGTTTCTCCTTTCGATGCTGTCATCGAAAATCTTGGAGGGAAATTTTTCCGTGAGAACGCTGAGAAAACCAAAAGTAATATAACTTTGCCGCCTCATTTTTTCACTTCGCCTATTTACTTTTCTCAGCTTTTCATCTCGTTAACACCTCCACCACCTAAAACGAAATTAACCCTCTCTTCCGATCACCGAAATTTGCCTTCATCAGTGCCGCTTCATCGTTCAAACATCTCCCTTCACCATTCTTTCGATTTCGAATCCGAATCATCACTGCTAGCTGCTCCCTCTACAGGCATTAACGACACAGAAAGTATCAATGGTCAAATTGTTGAAGTTCCAACTCTTAGAATTTACACACTCTATGAATTGAGGATGGCAACGAGAAACTTTAAACTCGATCCAGTTATTGAAGGAGGATTCAGCTTTGTTTACAAAGGATGGGTAGATAGTAGTACTTTGAATCCTACTGGAATGCCAGGACAAGGAATTGTTGTTGCAGTTGAAAAACTTAACCCCGAGAGCATTCTAGGACTAAAAGAGATGCAGGCTGAAGTGAACGCTGTAGGAAGTTTATCGCATCCAAACCTAGTCAAACTCTTGGGATATTGCATAGAAGACGAAGAAGCTCTTCTTGTTTATGAATACATGACAAAAGGAAGCTTAGAGAATCACTTATTTAGAAAAGCAACTGGCCCTGATCCACTGTCATGGAATACCAAGGTTGAAAATATTGATAGGAGCAGCCCGAGGGCTAGCATTCTTGCATTATTCAAAGCAGAAAATGTAGCAAAAGCTTCTGTAATTAAGAAAGAAGAAAAGCTGGAAGGAAGGCTTGGAGAACTCTATCCCACATTCGTGAAGCTGATGCTTCAGTCGCATACAACAGGAGGGGCTTCCCAATCATTTCTGTATCAAGCATCTACCAAAAAGGAAGAATCGATATATCTTATTGATGAAGATGGAGATGAGACAAGGATACTTTATTTGGCAGCAAAAAAGGGTTGA

Protein

Gene

>g179267.t1
ATGCGGAAAAGTATTCAAGACTTGTTCAACTTACTGCAAAGGGAACCGCCCATGTTTGGCATCTTGTTGAAAGGGCACGGAAAGGTGTATTGCCCGTTGTCCCTAATCCATTTATGGATATTTAACTTTCATGGAATGAATATTTCACTATAACAATTCACATGTTGAAGTGTGTAGTGATGAAATAAAGACTATTTTCTGAAATGAAAATGTTATCTATAAACTTATTATATGTTATGTGATTTTATGTTATTTCTTGATGAATTTTTTTAGTATAATTATTTTGTTGCATCGGAGATTTTGAAACTAAATCTCTTAGCTAAAGCTTGTGTAGATGAAATTAAGTTAGCAATTTATATAAGTTAAGTTTAAAAATATCTAACATATACGGTGAAGAACATATCATGTGTATACATCAATAGCGTTGAAAGAAAATAAATAAGAAGATTGACGAGGGTTTATGCCCTTCATGCCAATAATCTTCCATTATATATATACATCTTATCCTTCCACTCATCGCCTTCATTCATTTCCCTTTCAATTATTTTAAATTTCTCCCATAATTTTCTAACCATGTGAACATAAGTGCAATCACGCGTTAATGTTATAAGCTTGTTTGATTTTAGAAATTAAGTGATTGTAACTAAACTTAAAATTGAACGTACTATAATAGTAGTAAAATATTTTCTCATGTATGGTAAATATTTTAATTGTGTGTTTTTACCATGTTGGAGTTCCTATATTAAAACATGAGAAGTTCTATAGCAAGCATTATTTTACTTCGAAGAAAAGCATTTTCTAAGTCGGAAGAAGAAATTTTTTTATTAGAAGAAGCAAGTAGTGTTTCTAATGACGTTCAGATGCATTTTCCAGTTGTGAACAAAAGTTCATGATACTATAAAGACCCACTACTTAGTTCATGTGTTAAAGATTATAGGATGAATGGATATAATTCATGAACTTTTTTTTAGAGTTATTACATTTATATTCGTACTGATCCAACTTCATTCACTACAAGAAAAACACCTTTGACAGCAACTATTCTCAGCGTTTCTCCTTTCGATGCTGTCATCGAAAATCTTGGAGGGAAATTTTTCCGTGAGAACGCTGAGAAAACCAAAAGTAATATAACTTTGCCGCCTCATTTTTTCACTTCGCCTATTTACTTTTCTCAGCTTTTCATCTCGTTAACACCTCCACCACCTAAAACGAAATTAACCCTCTCTTCCGATCACCGAAATTTGCCTTCATCAGTGCCGCTTCATCGTTCAAACATCTCCCTTCACCATTCTTTCGATTTCGAATCCGAATCATCACTGCTAGCTGCTCCCTCTACAGGTACTTATTTTCAACCATTCGTCGGTTTTATTTGGGTTTAAAATGGGTTCTTCAATTAGTTTATCGATTTTGTTATTTCAGGCATTAACGACACAGAAAGTATCAATGGTCAAATTGTTGAAGTTCCAACTCTTAGAATTTACACACTCTATGAATTGAGGATGGCAACGAGAAACTTTAAACTCGATCCAGTTATTGAAGGAGGATTCAGCTTTGTTTACAAAGGATGGGTAGATAGTAGTACTTTGAATCCTACTGGAATGCCAGGACAAGGAATTGTTGTTGCAGTTGAAAAACTTAACCCCGAGAGCATTCTAGGACTAAAAGAGATGCAGGTAAAACGATAGCAATAGCAATAGTAATAAAAAACTTAAGTGGTCAAAATAAGCTAGCATATTTTGGCGAGGTTAGTAAAATTTATATTTATGGATTGTAACAATCTGTATAGACTAAAGATGACAATGATCATTAATCTAGTGATAAGGCAGCTTCTATAAATTGCTAAAGATATTGGATTTGAAAGTCTATATGCACTGTCAGTTTTTGTTCAGATTTAAATGAAAAATCAAGAGATGACATATTAGCAGCTGAAACATTGATGATACATAGGCAGTAACAAAAATACCACCAAAGTGTTCTAGAAAATAATGTTTGCTTAACGGTATGTTTGATATATTCATGACCCATCTATTGTATTCGTACTTGTTGTGACTGAAAAAAAAAAGCCAACTCTTGTATGTACGGAAAATGTCCTAACTAGTTGAAATGCTGTCTAAATATTTATTGAATTGATAAAATCGTTATTACTTTGCATCACCCTGTCAATTGATTCATTTATTGTAATGTGTATAGGCTGAAGTGAACGCTGTAGGAAGTTTATCGCATCCAAACCTAGTCAAACTCTTGGGATATTGCATAGAAGACGAAGAAGCTCTTCTTGTTTATGAATACATGACAAAAGGAAGCTTAGAGAATCACTTATTTAGAAGTGAGTTTTTGCATTTCTTACATATTATATATTAACAAATGTGATTATGATTTATAACACGGTATTATTTAGGCATAGCTATATATTCTTGTACCCTATTTGCTTTGAAATTGGATTATAACATAGATCTCTTATTGTCATCTATTTCTATAGCAATGTGTGTAATAAGTATAATGTGCATTTACTTTTATTGAACAGAAGCAACTGGCCCTGATCCACTGTCATGGAATACCAAGGTTGAAAATATTGATAGGAGCAGCCCGAGGGCTAGCATTCTTGCATTATTCAAAGCAGAAAGTTATCTATAGAGACTTTAAACCTCCTAATATACTTCTTGATTCGGTATAAAACAAATAAAATAAATTTGTTATTTTACTGTATATTTAGCATATGGTTTATATGTTTGCTTGCGTTGGTTGGGCAGAATTACAATCCAAAGCTATCTGATTTTGGAATTACAAAGAATAAACCAAATGGAGAACACCATCCTGTGGCTCCTCAGATTATACAAACTCATGGATATGCTGCTCCTGAATATATTGCTACATGTTGTTATTTTATTATAATCCTGCTCTGATATAATCACTAATTGATCTAAAGTACGAATGCTTTTCATTTAGAGATCAAATCTGCGAATGAATAGTGTAGTTCTCAACTAGAACTTATGATACAAATTCTAATACAATCGTACGCTAAGTTTATATTCAATGAAATTAGTAACTGATTTTTCTTTTGTCATGATCAGTTTTTCCCTTCAAATAGTGTTTTTCTGGTTTTTGAAATACATTGGCCAGTAAAGTCATTGTCAACTAAGAACTTAATCTGTAACTATTCAATCACTCCATTTTACTCAATTGTTAATTCATGCAGATAACATGTTAGCTAACATGTTTGACATATAAAATATATTGAGTATGTTACAAGTGAACATTGGTGATACGATATTCAGGTCATTTGTCCATGAAAAGTGATGTATATGGGTTTGGTGTAGTACTGCTAGAAATGCTATCCGGTCTAAGAACAATTGATCACGACCGTCCAAACCAAAAGCGGAATTTCTATAGAAATTGTTAATATTTTGAATTTCTATAGAAATTCAGCCTTTATCCTCTATTACGAGGCCCAACCCACTACAACATGACTTCAAAGCCCGATGTAAGCAATTGGAGAAGCTATGGACGCATAAGCTTTATGTCATCTGTCTATGATGCGGGACATTTTAAATCCACTTTTGTCTTCTTTTCTTCCACAACAAGTTTTTTTTACTTTAATTTATGCACATTGCATTGCTTTTTGGAAACTTTACTTAAAAGACAATTGTTATACTAACCTTACATTATATCAAAAGCAAATTTTGATCAAAATAAATATATGAGTATGAATCATATTTAGATAATTAAAACTAATATACAAGAATAAATCTTTTTGAATCAAAATTAGTAACAAATCAGATGTATAAACAAACCAAAATAATCCACGGTTCTGACGGTTCAATCGGTCAAACCCTTAAAATCTTAAAACTTAAGTCCCCACGGTCCGATTCGCGGTCTGATCATGAAAACTATGCTTAATTTTGTGATTCTGGGATATATCTCTACTTGTAGCAGCAACTCACGGAGATAACAACCAATTTTTGCTTGCTAATAATTCTGGAGGCATGGGAAGGTGAAGGTAATAACGCTTACCTTTTTATGTATCGACTACTTATCTAATTGAAATAATTCTAAAGCTACAGAGTAAGAGTACTACTTTATGTTATCAAACTGATCTACAATTGCCTGTACAGATGATCTTGTGGATCATTATTAACTTTATGGTTAGCTCTATATTATCCGATGGAATAGTATTTTTTTTTGAAAATGACAATTATAGATATTTTTGATAAATATAGTGATAGCACTGTATATTCTTTCTCTCAGGTAACAAAATCAGGAATGAAAGAATTCTTTGAATATAAGTGTGGCAGGTTAGTAAACTTGTCAGAGTTTTGTTGGTATATGTTGTTAACTACTAACATATATGGTTCTTGATATTCAAGTGAGTGTATTAAATGATTTTTTTAGAAACTTATATATGACAGGTGCTGGAGCTTGTTTATCTAGCTTGAAAGTAAGTATACAAAAGATATTATATTTAAGAGGCCCAAGCCATTTTAGCTGAAATAATTATGATTTTTATACAATATTATAAATGTAGATCAAGCAGTAGAACATCAACATATAGAGATATAGGCAACCATGTGTATGCATCAGATGTAGCAAAAGCTTCTGTAATTAAGAAAGAAGAAAAGCTGGAAGGAAGGCTTGGAGAACTCTATCCCACATTCGTGAAGCTGATGCTTCAGTCGCATACAACAGGAGGTTTTTGGTTGGTGAGTGTTATGTATAACAATGAATGAAGTTCTGTGTACAATTGATATGTTACTGAGGGGTTTTAACTTCATGGATAGGGGCTTCCCAATCATTTCTGTATCAAGCATCTACCAAAAAGGAAGAATCGATATATCTTATTGATGAAGATGGAGATGAGACAAGGATACTTTATTTGGCAGCAAAAAAGGGTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009395361.1	3.9e-44	PREDICTED: protein kinase APK1B, chloroplastic
Swissprot	P43293.2	5.7e-40	PBS1-like protein 11
trEMBL	A0A804IL61	2.8e-44	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G02290.1	56.93	5e-42	168	NAK	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g179267	AT5G02290.2	137	57	2	160	295	45	180	56.93	5e-42	168
g179267	AT5G02290.1	137	57	2	160	295	45	180	56.93	5e-42	168
g179267	AT2G17220.1	138	55	2	159	295	63	197	57.25	8e-41	164

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	190	281	44.3	1.2e-11

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0008150	P	biological_process
GO:0009909	P	regulation of flower development
GO:0009910	P	negative regulation of flower development
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048519	P	negative regulation of biological process
GO:0048580	P	regulation of post-embryonic development
GO:0048581	P	negative regulation of post-embryonic development
GO:0048831	P	regulation of shoot system development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051093	P	negative regulation of developmental process
GO:0051239	P	regulation of multicellular organismal process
GO:0051241	P	negative regulation of multicellular organismal process
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0060860	P	regulation of floral organ abscission
GO:0060862	P	negative regulation of floral organ abscission
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:2000026	P	regulation of multicellular organismal development
GO:2000241	P	regulation of reproductive process
GO:2000242	P	negative regulation of reproductive process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00924	E2.7.1.-; kinase	EC:2.7.1.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network