result

Gene information

Detail information of g185022

Location

Gene	Chr	Start	End	Strand
g185022	Scaffold_48889:HRSCAF_431975	333232	335772	+

Sequences

CDS

>g185022.t1
ATGAATCTAATTATCATTCTACTCTTTCTTTCTTTCCCAATTCTTTTGTTTTCTCAAAACCAGACAAATTTACCATGTCCATTAGATTTTTCAGTGTTGAACAAATTCATATCTACTGCTAAAGAAAATCCTTCACTGTTACCAAATGACACTCCTACTTTGTGTCAGTACGCTTTAGGAGCTTTGCATCTTGTAGAATCTAAATTCTTGAAAACCAACGGTTTGTTTTATCCTCCGTTAAATTCTTCTTCTTCATGCTGGAATAATTTCCAGACCCTTATTGCTCCTTTCTTCCCCTCACCTTTTAATTTGCTTAGAGATTGTGGGTTTCAAGCAAACTGGATTTCTCAAGGATGCATGAACATTTCAACCCGCTCCGATTTCGAGAAGATTGTACCACAATCTGCAATACAAGACATGAACCGAAACTGCAACCAATCACTAGGAAGCTCAGCATTTTCATCACAGTGCACTGCATGTTCTACAAGCTTAATTCGTGCCAAGTCTTATCTTCCTGGCCCTGATATTGGTAATGTCACTCAATGCACAAACTATCCTTATATGTATGCTGCTGGATTACTCAATCGATTTGGCCCCGATGACAATGATACTGCCTTATGTCTGTTCTTACTGAAAACCCAGTCTGATATAGACAATAATAACAATGGTGGTGGTTTTCAGAATTGGATAATTGGAGTTATTGTTGGCAGCATTTTGTTATTGGTTTTGATTGGGTTATCAGTTTGGTATCTAATAAGAAAAAGGGAAGATAGAAACAGGAGGTTGAAGAGAACAAAAGCCACAGATACAAAATCACAAGCTTTAGAATCGATCAGCGCTAGCACCACTTTAGTTAAATACAGTTTCGAGGAGATTAGAGCTGCCACTAAAAAATTTTCTAGGGACAACATTATAGGAAAAGGAGGATATGGGAATGTGTATAAAGGGAAACTAAGAGATGGATCAGAAGTTGCATTAAAAAGATTCAAAAACTGTTCAGCTGCTGGAGACGAGAGCTTTGCTCACGAAGTTGAAGTAATTGCAAGCGTAAGGCATGTAAACTTAGTTGCATTGAGAGGATATTGTACTGCCACAACTCAAATGGAAGGGCATCAAAGGATCATAGTATGTGATTTGATGAAGAATGGAAGTTTGCATGACCATTTATTTAGTTCTGAAGGAAAGAAGCTAAGTTGGCCTATAAGGCAAAGAATAGCGATAGGGACAGCAAGAGGGTTAGCGTACCTACATTATGGGGCACAACCAGCTATACTTCATAGAGATATAAAAGCAAGTAATATATTACTGGATGATATGTTTGAACCTAAGGTAGCAGATTTTGGACTAGCTAGATTTGCACCTGAGGGTATGTCTCATGTTAGTACTAGAGTGGCAGGTACTTTAGGGTACGTTGCACCCGAATATGCACTGTATGGGCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGGGTGGTTATGCTTGAGCTTTTAAGTGGGAAAAAAGCTTTTTTATCTTCTGAGAATGGGCAGAATGTGCTTCTAACTGACTGGGCTTGGTCACTGGTGAGGGCAGGAAAGCCTTTAGATGTGATTGAAGATGGAATAGATGAAATGGGGCCTAGAGAGATTATGGAGAAATATGTACTCATTGGTGTATTGTCGTCTCATCCTCAGTTACATGCAAGGCCCACTATGGATCAGATATTGAAAATGATGGAGTCTGATTCTTTAAGTGTTAGTAGTATTCCGGATCGACCTTTGCCTCTTGTAGCAAATTTGGAAGAGATTGAAAGATCGATTAGCAGCAACGGGTCGGGGCAATTGTCCAGCAGTGTTTCTGGGTTTCAGTCGTTTGGTGGTGGAAATGAAGTTGAGGTTCTAATTGATAGAACCGAGGAAGATATTCTTGTGGGTCATAATGAATCTGAACCTAGTACGCCTGGTTAA

Protein

Gene

>g185022.t1
ATGAATCTAATTATCATTCTACTCTTTCTTTCTTTCCCAATTCTTTTGTTTTCTCAAAACCAGACAAATTTACCATGTCCATTAGATTTTTCAGTGTTGAACAAATTCATATCTACTGCTAAAGAAAATCCTTCACTGTTACCAAATGACACTCCTACTTTGTGTCAGTACGCTTTAGGAGCTTTGCATCTTGTAGAATCTAAATTCTTGAAAACCAACGGTTTGTTTTATCCTCCGTTAAATTCTTCTTCTTCATGCTGGAATAATTTCCAGACCCTTATTGCTCCTTTCTTCCCCTCACCTTTTAATTTGCTTAGAGATTGTGGGTTTCAAGCAAACTGGATTTCTCAAGGATGCATGAACATTTCAACCCGCTCCGATTTCGAGAAGGTACAATTGCTAATTTTCAGTCTATCTGTTTAAGTTTTGATTTGAACTATGTATGTTTGATGCTGCAGTTAATATTTGTTAAAGGGCACTTGACCATAAAATATTTTAACCCAGGGGTTGTTGTGTTTCTGCCTAATGTTTATTATGCATTTGGGATGTCTATAAGTACTCAATAATGGCACTTGACATAGATGGCACAACAGTTTGGTCCAATTTTTATCTGCCAGATAGAATATATATTGCCTATACTAGGAGAGGAGGTTCACATATTGCACTACTTGCGCGCAATGTCCAAAAGGTTAAATCATTTGTTTCTAGTCTTTAACCTGCTCTCTTGGTGCGTATGTAGAATAATGGCAACCTATTATATCATTCTTATTAAAAGAATAAGGTAGAAGCTGAGACATATGTAAGTACCTTATGCTTCTATGTACACTCCAACTTATTGCAAGCAGATTACAGAAAAAACATCTTAGTATAATCATAATTCTATTTTTGAAGTAGACATGTAACCTACTTAACCTGCACTTCCACTTATGCAATATTAAAATTTTCCTTTTCTTAATTAACTACTTTTGGTAACTTTAACAGATTGTACCACAATCTGCAATACAAGACATGAACCGAAACTGCAACCAATCACTAGGAAGCTCAGCATTTTCATCACAGTGCACTGCATGTTCTACAAGCTTAATTCGTGCCAAGTCTTATCTTCCTGGCCCTGATATTGGTAATGTCACTCAATGCACAAACTATCCTTATATGTATGCTGCTGGATTACTCAATCGATTTGGCCCCGATGACAATGATACTGCCTTATGTCTGTTCTTACTGAAAACCCAGTCTGATATAGACAATAATAACAATGGTGGTGGTTTTCAGAATTGGATAATTGGAGTTATTGTTGGCAGCATTTTGTTATTGGTTTTGATTGGGTTATCAGTTTGGTATCTAATAAGAAAAAGGGAAGATAGAAACAGGAGGTTGAAGAGAACAAAAGCCACAGATACAAAATCACAAGCTTTAGAATCGATCAGCGCTAGCACCACTTTAGTTAAATACAGTTTCGAGGAGATTAGAGCTGCCACTAAAAAATTTTCTAGGGACAACATTATAGGAAAAGGAGGATATGGGAATGTGTATAAAGGGAAACTAAGAGATGGATCAGAAGTTGCATTAAAAAGATTCAAAAACTGTTCAGCTGCTGGAGACGAGAGCTTTGCTCACGAAGTTGAAGTAATTGCAAGCGTAAGGCATGTAAACTTAGTTGCATTGAGAGGATATTGTACTGCCACAACTCAAATGGAAGGGCATCAAAGGATCATAGTATGTGATTTGATGAAGAATGGAAGTTTGCATGACCATTTATTTAGTTCTGAAGGAAAGAAGCTAAGTTGGCCTATAAGGCAAAGAATAGCGATAGGGACAGCAAGAGGGTTAGCGTACCTACATTATGGGGCACAACCAGCTATACTTCATAGAGATATAAAAGCAAGTAATATATTACTGGATGATATGTTTGAACCTAAGGTAGCAGATTTTGGACTAGCTAGATTTGCACCTGAGGGTATGTCTCATGTTAGTACTAGAGTGGCAGGTACTTTAGGGTACGTTGCACCCGAATATGCACTGTATGGGCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGGGTGGTTATGCTTGAGCTTTTAAGTGGGAAAAAAGCTTTTTTATCTTCTGAGAATGGGCAGAATGTGCTTCTAACTGACTGGGCTTGGTCACTGGTGAGGGCAGGAAAGCCTTTAGATGTGATTGAAGATGGAATAGATGAAATGGGGCCTAGAGAGATTATGGAGAAATATGTACTCATTGGTGTATTGTCGTCTCATCCTCAGTTACATGCAAGGCCCACTATGGATCAGATATTGAAAATGATGGAGTCTGATTCTTTAAGTGTTAGTAGTATTCCGGATCGACCTTTGCCTCTTGTAGCAAATTTGGAAGAGATTGAAAGATCGATTAGCAGCAACGGGTCGGGGCAATTGTCCAGCAGTGTTTCTGGGTTTCAGTCGTTTGGTGGTGGAAATGAAGTTGAGGTTCTAATTGATAGAACCGAGGAAGATATTCTTGTGGGTCATAATGAATCTGAACCTAGTACGCCTGGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	RRT49545.1	3.0e-222	hypothetical protein B296_00046682
Swissprot	P93050.1	2.6e-191	Receptor-like kinase in flowers 3
trEMBL	A0A426YCT7	2.2e-222	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G48010.1	56.16	0.0	691	RKF3	receptor-like kinase in in flowers 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g185022	AT2G48010.1	625	246	8	5	624	7	608	56.16	0.0	691
g185022	AT1G11050.1	634	313	20	26	621	27	621	38.49	9e-97	351
g185022	AT1G56140.1	358	191	6	230	587	637	974	41.06	1e-70	264

Ortholog group

Species	Genes
Allium cepa	g185022.t1
Allium fistulosum	AfisC1G02685
Allium sativum	Asa7G02321.1
Arabidopsis thaliana	AT2G48010.1
Oryza sativa	LOC_Os01g28730.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	300	510	145.5	1.7e-42

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K02900	RP-L27Ae, RPL27A; large subunit ribosomal protein L27Ae	EC:-	Ribosome	ko03010

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network