result

Gene information

Detail information of g186747

Location

Gene	Chr	Start	End	Strand
g186747	Scaffold_49105:HRSCAF_432191	586369	587836	+

Sequences

CDS

>g186747.t1
ATGCTCATGTCTTTCTCATCATCTAAATCACATCAAATTCTTTCTAGACTTGCACACTCCATGAAAGCTCTTCATTTGATGGCATTCTCAGTTGGCTTTACCAGATTCATCATATCTAGCCACCCTGAAACTGCCAAAGAAATACTTAACAGTTCTGCATTCGCTGACCGCCCTATAAAAGAATCAGCTTACGAACTTCTATTCAACAGGGCTATTGGTTTCGCGCCTTTCGGTGACTACTGGAGAAACTTGAGAAGAATTAGCGCTACTTGTTTGTTCAGTCCTAAAAGAATTCAGTCCTTTAGCATGTCTCGAAAAGCCACTGGTTTGAAAATGGTGGAAGACGTTAAGGCCTTAATGGAGAATGATGGTGTAGTAGAAGTTAAGAAAGTCTTGCATTTCGGGTCCTTGAACAATATCATGATGAGTGTGTTCGGCAAACAATATGAATTCGGCAGTGCAGAGGGGTTAGAGTTGGAAGAGTTGGTCAGTGAAGGGTATGAGTTGCTTAGTGTTTTCAACTGGAGTGACCATCTGCCTCTGCTGGGATGGTTTGATTTTCAAGGAGTTAGAAGAAGGTGCAGGGTATTGGTTAACAAAGTTAATGTTTTTGTTGGTAAAATCATCGAAGAGCATAGAGTGAAAAGAAAGAATGGAGGTGGTGGCACTGGGGACTTTGTTGATGTATTGCTCGATTTCGAGAAGGAAGAGAAGTTGTCTGAATCTGATATGGTAGCTGTGCTTTGGGAAATGATATTTAGAGGAACAGACACAGTGGCCATAACACTAGAATGGATCATAGCAAGGATGGTTCTACACCCGAATATTCAATCTAAACTCCAATCCGAAATTGATTCAGTCACCTCGAAATCAAGACCCATATCAGACACAGACATAGAAAATCTTCCGTACTTGCAAGCAGTAGTGAAAGAGTGCTTCAGGCTTCACCCACCGGGTCCGCTGCTCTCATGGGCACGCCTGGCAATCCACGACGTTCAGATCAATGGTCACCACATTCCGGCTGGAACTACTGCGATGGTCAACATGTGGTCGATCACTCATGATGACTTTAACTGGGCTAACGCAAAGGAGTTCGATCCAGAGAGGTTTCTGAAGGAAGATGTTTCGATATTAGGCTCTGATCTAAGGCTGGCTCCTTTTGGTTCTGGTCGTAGGGTATGCCCCGGTAAGGCTTTGGGATTGGCCACAGTTCATCTTTGGCTGGCGCAGATGATTCAGAGTTTTAGATGGGTTAAGGCTGATGAATATGGGGTTGATCTCGAAGAGTGCTTGAAAATGTCCATGGAGATGAAAATTCCTTTGATTTGCAAGGCTGTGCCAAGGTTACGATGTTAA

Protein

Gene

>g186747.t1
ATGCTCATGTCTTTCTCATCATCTAAATCACATCAAATTCTTTCTAGACTTGCACACTCCATGAAAGCTCTTCATTTGATGGCATTCTCAGTTGGCTTTACCAGATTCATCATATCTAGCCACCCTGAAACTGCCAAAGAAATACTTAACAGTTCTGCATTCGCTGACCGCCCTATAAAAGAATCAGCTTACGAACTTCTATTCAACAGGGCTATTGGTTTCGCGCCTTTCGGTGACTACTGGAGAAACTTGAGAAGAATTAGCGCTACTTGTTTGTTCAGTCCTAAAAGAATTCAGTCCTTTAGCATGTCTCGAAAAGCCACTGGTTTGAAAATGGTGGAAGACGTTAAGGCCTTAATGGAGAATGATGGTGTAGTAGAAGTTAAGAAAGTCTTGCATTTCGGGTCCTTGAACAATATCATGATGAGTGTGTTCGGCAAACAATATGAATTCGGCAGTGCAGAGGGGTTAGAGTTGGAAGAGTTGGTCAGTGAAGGGTATGAGTTGCTTAGTGTTTTCAACTGGAGTGACCATCTGCCTCTGCTGGGATGGTTTGATTTTCAAGGAGTTAGAAGAAGGTGCAGGGTATTGGTTAACAAAGTTAATGTTTTTGTTGGTAAAATCATCGAAGAGCATAGAGTGAAAAGAAAGAATGGAGGTGGTGGCACTGGGGACTTTGTTGATGTATTGCTCGATTTCGAGAAGGAAGAGAAGTTGTCTGAATCTGATATGGTAGCTGTGCTTTGGGTAAGCTTTGAGAATGTAACCGTTTTGAAACAATTGTATACAAAAGTTCATTAATATTTTTACATTCTTTCAAGAATTCTACGTAACTCAATGTATATTCAATGCAATTCAGGAAATGATATTTAGAGGAACAGACACAGTGGCCATAACACTAGAATGGATCATAGCAAGGATGGTTCTACACCCGAATATTCAATCTAAACTCCAATCCGAAATTGATTCAGTCACCTCGAAATCAAGACCCATATCAGACACAGACATAGAAAATCTTCCGTACTTGCAAGCAGTAGTGAAAGAGTGCTTCAGGCTTCACCCACCGGGTCCGCTGCTCTCATGGGCACGCCTGGCAATCCACGACGTTCAGATCAATGGTCACCACATTCCGGCTGGAACTACTGCGATGGTCAACATGTGGTCGATCACTCATGATGACTTTAACTGGGCTAACGCAAAGGAGTTCGATCCAGAGAGGTTTCTGAAGGAAGATGTTTCGATATTAGGCTCTGATCTAAGGCTGGCTCCTTTTGGTTCTGGTCGTAGGGTATGCCCCGGTAAGGCTTTGGGATTGGCCACAGTTCATCTTTGGCTGGCGCAGATGATTCAGAGTTTTAGATGGGTTAAGGCTGATGAATATGGGGTTGATCTCGAAGAGTGCTTGAAAATGTCCATGGAGATGAAAATTCCTTTGATTTGCAAGGCTGTGCCAAGGTTACGATGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008787550.1	4.5e-193	cytochrome P450 78A5-like isoform X2
Swissprot	Q9LMX7.1	9.5e-172	Protein KLUH
trEMBL	A0A8K0ICK5	8.6e-194	Cytochrome P450 78A5

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G13710.1	66.89	2e-176	615	CYP78A5;KLU	cytochrome P450, family 78, subfamily A, polypeptide 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g186747	AT1G13710.1	453	143	5	2	448	61	512	66.89	2e-176	615
g186747	AT1G74110.1	464	150	7	1	448	75	536	63.79	2e-169	592
g186747	AT2G46660.1	443	191	4	6	444	87	524	54.85	9e-138	487

Ortholog group

Species	Genes
Allium cepa	g186747.t1; g466793.t1; g526980.t1; g526981.t1
Allium fistulosum	AfisC2G01388; AfisC2G07650
Allium sativum	Asa2G06982.1; Asa6G02226.1
Arabidopsis thaliana	AT1G13710.1; AT1G74110.1
Oryza sativa	LOC_Os03g30420.1; LOC_Os03g40610.1; LOC_Os07g41240.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	12	421	277.1	2.2e-82

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0005783	C	endoplasmic reticulum
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0040007	P	growth
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0008284	P	positive regulation of cell proliferation
GO:0009058	P	biosynthetic process
GO:0009791	P	post-embryonic development
GO:0009908	P	flower development
GO:0012505	C	endomembrane system
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019748	P	secondary metabolic process
GO:0022414	P	reproductive process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0035265	P	organ growth
GO:0040008	P	regulation of growth
GO:0040009	P	regulation of growth rate
GO:0042127	P	regulation of cell proliferation
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0044550	P	secondary metabolite biosynthetic process
GO:0045927	P	positive regulation of growth
GO:0046620	P	regulation of organ growth
GO:0046622	P	positive regulation of organ growth
GO:0048367	P	shoot system development
GO:0048437	P	floral organ development
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048589	P	developmental growth
GO:0048608	P	reproductive structure development
GO:0048638	P	regulation of developmental growth
GO:0048639	P	positive regulation of developmental growth
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0051094	P	positive regulation of developmental process
GO:0051239	P	regulation of multicellular organismal process
GO:0051240	P	positive regulation of multicellular organismal process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0090567	P	reproductive shoot system development
GO:0099402	P	plant organ development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20619	CYP78A; cytochrome P450 family 78 subfamily A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network