result

Gene information

Detail information of g188305


Location
GeneChrStartEndStrand
g188305Scaffold_49325:HRSCAF_432411117939118715-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010934031.11.4e-66B3 domain-containing protein Os02g0683500
SwissprotQ6EU30.19.3e-55B3 domain-containing protein Os02g0683500
trEMBLA0A6I9S6581.0e-66B3 domain-containing protein Os02g0683500

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G46870.150.811e-54 210NGA1AP2/B3-like transcriptional factor family protein

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Ortholog group
SpeciesGenes
Allium cepag188305.t1; g261632.t1
Allium fistulosumAfisC2G00153; AfisC3G08185
Allium sativumAsa2G06738.1; Asa2G06741.1; Asa6G05894.1
Arabidopsis thaliana
Oryza sativaLOC_Os03g02900.1; LOC_Os04g49230.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family3413696.37.4e-28

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009908Pflower development
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0022603Pregulation of anatomical structure morphogenesis
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048831Pregulation of shoot system development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0090567Preproductive shoot system development
GO:0099402Pplant organ development
GO:1900618Pregulation of shoot system morphogenesis
GO:1901371Pregulation of leaf morphogenesis
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000024Pregulation of leaf development
GO:2000026Pregulation of multicellular organismal development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905421

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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