Detail information of g190630


Location
GeneChrStartEndStrand
g190630Scaffold_49711:HRSCAF_432797232278242135-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274241.15.8e-62MADS-box transcription factor 23-like isoform X3
SwissprotQ6EP49.23.1e-52RMADS218
trEMBLA0A6P5EI308.9e-57MADS-box transcription factor 27-like isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G37940.158.564e-71 264AGL21AGAMOUS-like 21

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag190630.t1
Allium fistulosumAfisC4G02002
Allium sativumAsa4G02103.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105783.35.3e-24
PF01486.14K-boxFamily8517085.91.4e-24

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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