Detail information of g196977


Location
GeneChrStartEndStrand
g196977Scaffold_50523:HRSCAF_433609967087979124-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274674.17.2e-21putative B3 domain-containing protein Os04g0346900
SwissprotQ8L3W1.17.1e-05Protein VERNALIZATION 1
trEMBLA0A8B7BVD53.2e-18B3 domain-containing protein Os12g0592300-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G00260.129.681e-2097.8MEE45Transcriptional factor B3 family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag196977.t1; g331328.t1; g331333.t1; g352580.t1; g524593.t1; g58468.t1
Allium fistulosumAfisC3G06682; AfisC3G06683; AfisC6G02221
Allium sativumAsa2G05220.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g10420.1; LOC_Os03g11370.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family13221336.53e-09
PF02362.18B3Family26934645.64.6e-12

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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