result

Gene information

Detail information of g198961


Location
GeneChrStartEndStrand
g198961Scaffold_50769:HRSCAF_433855222108224224-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_029127165.12.6e-61ethylene-responsive transcription factor RAP2-7 isoform X1
SwissprotA0A0N7KJT8.13.1e-56Protein SHATTERING ABORTION 1
trEMBLA0A151TN501.8e-61Ethylene-responsive transcription factor RAP2-7

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G60120.147.927e-47 184TOE2target of early activation tagged (EAT) 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag198961.t1
Allium fistulosumAfisC1G06473
Allium sativumAsa7G02976.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain9614537.12.5e-09

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0003002Pregionalization
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0007389Ppattern specification process
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009908Pflower development
GO:0010073Pmeristem maintenance
GO:0010093Pspecification of floral organ identity
GO:0010154Pfruit development
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0048646Panatomical structure formation involved in morphogenesis
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0035670Pplant-type ovary development
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048316Pseed development
GO:0048367Pshoot system development
GO:0048437Pfloral organ development
GO:0048438Pfloral whorl development
GO:0048440Pcarpel development
GO:0048444Pfloral organ morphogenesis
GO:0048449Pfloral organ formation
GO:0048467Pgynoecium development
GO:0048481Pplant ovule development
GO:0048507Pmeristem development
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0090567Preproductive shoot system development
GO:0099402Pplant organ development
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0090696
GO:0090697
GO:0090698
GO:0090701
GO:0140110
GO:1905392
GO:1905393

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09284AP2; AP2-like factor, euAP2 lineageEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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