result

Gene information

Detail information of g19954

Location

Gene	Chr	Start	End	Strand
g19954	CHR3	164677348	164679246	-

Sequences

CDS

>g19954.t1
ATGGGTTTCCAAACAGTTCATAAACTTGTAATCATACTCATATCGATAGTATCATACTTTCCAGACCATTCAATTTCATCAAACTTAACATCATGTCCTATGGACTTATCTTACATAACAACATTTCCTTGGAACCATACTCAGTGTCTTTCTTCAACCAACCACAACAATCTGACCGACTGCTGCCAGACTCTATTAAGCCTAATCGGGATCGGATTCTCCACCCGCCTCCGTTCAACTTCTCACTTTCGCCTTCCCGATATCTCATCCTCTTCCGCCTGCCTTTCTTCTTTACAAACACATCTAAATTCACTGAATCTTCCACCCGACACAGTCTCATCTTGCTTCCCAGATCCATCTCGGTTTGTAATAGATCCATCGTACTGTGCAGGAATCACTACGCTTCAAGATTGGAAAAAAAAAATGGGCCCTAATTCTACTGTTCTTGACTCCGCCTGCAGTGGAGATTTATCCGACTTGACTAAGTGTGGGTCCTGCGCAAACGCTGGATTTGAGATTGCTTCTGAACTCACTACCCTGGATAAAAATATATCCCATGCTACCAATTGCTTTTATCTTACCGTGACCTATGCAGCTGGAATTGCTAACGCTAATGCTTTAAAAGATCCTCTTTACGCAGCTTGCATATTCGGGCTTCAATTGGTTTTGCCTGCAACTGCCGATAATTCTACGAAAAAGTCCAATACAGTTGCCGTTGCTGCATCATCTGCAGCTGGAGCAGCACTTTTGGTATTCATTGCATGTTTAGTACTGTTTTATCTATGGAGGGAGAGGAAAAGGAAGAAGGATGAGCTCGCAAAGCAGGTTGAGAGCATGCGGTCACATCCGCGACCCAATACAGGATCTATATGGTACGAGTTCAAGGAGCTGGAGAAGGCCACAAGCAACTTTTCACAGAGGAATTTGATCGGAAGAGGCGGGTTTGGGGTAGTTTACAAAGGAGTGCTAAACGATGGGAGCGAGGTTGCAGTGAAGAGGGTTCTAGAATCCGATTTCCAGGACGAGGAGTTCAAAAACGAAGTGGAAATCATCAGCAATTTGCGCCACAGAAATCTAGTGCCTCTGAGGGGCTGCTGCATCACAAACGAGGATAAAGAGGAAGGAAATCAGAGGTTTCTTGTCTATGACTACATGCATAATAGAAACCTTGATGATCATATTTTTGTGACAGGTAACAGTAGTAGAATGTCACTGTCTTGGCCGCAGAGAAAGAATATAATTCTAGACGTGGCTAAAGGGCTGGCTTATCTGCACTATGGGATAAAACCAGCGATATATCATCGTGACATAAAGGCTACTAATATACTGCTTGATAATGAAATGAGGGCAAGGGTGGCTGATTTTGGGTTGGCAAGACAAACCCGAGAAGGGCAGTCGCATCTGACTACACGGGTAGCGGGTACACACGGGTATTTGGCACCGGAGTATGCGTTGTATGGGCAGCTAACAGAGAAGAGCGATGTGTACAGCTTTGGAGTGGTGGTATTAGAGATAATGACGGGTAGAAAGGCAATAGATATGTCTTCACAGACGAGCATGGTTTTGGTTACAGACTGGGCATGGAGTTTGGTAAAGGCAGGGAGGATGGAGGAGGTATTCGATGAGAGTATATTGAGGGATGGTGAAGGGAAGCAGACTCCAAGGGGGATAATGGAGAGATTTGTGATGGTTGGGATATTGTGTTCGCATGTGATGGTTGCTTTGAGACCGACTATATCGGAAGCCCTTAAGATGCTTGAAGGGGATATCGATGTCCCGGGAGTGCCGGATAGACCGGTTCCTCTTGGACATGGAGTGCCGTATATGGATGGCAATACTTTTAGTACTGCTTCACCCATGAGTGGGTTTAATCTTAATTTTAGGGATATGCTAAGATAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020701751.1	2.0e-210	probable receptor-like protein kinase At1g11050
Swissprot	O04086.1	2.7e-196	Probable receptor-like protein kinase At1g11050
trEMBL	A0A835SDG0	5.5e-215	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G11050.1	59.80	0.0	724		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g19954	AT1G11050.1	607	232	8	31	632	26	625	59.80	0.0	724
g19954	AT2G48010.1	607	326	18	9	602	2	574	38.55	5e-104	375
g19954	AT1G56145.1	371	196	7	231	599	622	968	40.16	1e-74	278

Ortholog group

Species	Genes
Allium cepa	g19942.t1; g19954.t1
Allium fistulosum	AfisC3G03700; AfisC3G03703
Allium sativum	Asa2G02966.1; Asa2G02971.1; Asa2G02973.1; Asa4G06454.1
Arabidopsis thaliana	AT1G11050.1
Oryza sativa	LOC_Os01g66020.1; LOC_Os05g34950.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	305	519	154.0	4.3e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network