result

Gene information

Detail information of g200205

Location

Gene	Chr	Start	End	Strand
g200205	Scaffold_50946:HRSCAF_434032	314591	316075	-

Sequences

CDS

>g200205.t1
ATGGCACTAACCCCTTCATTCGTACCCAAATCCTCCCTCTTCCAGAAACCCAGTCAGAGTCCACCTACCCTCCACTCCAAGCTCCCCCTCCGCAAAATCCCTGGCGACCACGGCCTCCCCATCCTCGGCCCCTTCAAGGACCGGCTCGACTTCTTCTACCGGCAGGGCCGGGACGAGTTCTTCAAATCCCGGATCCGCCTCCACAACTCCACCGTCTTCAAAGTCAACATGCCTCCCGGACCCTTCCTCTCCTCCGATCCCCGGGTCATCGCTCTCCTCGACTCCGCCTCCTTCCCCGTCCTCTTCGACCCCGACCTCGTCGAAAAGAAAGACCTCTTCACCGGCACCTTCACCCCCTCCACAGACCTCTCCGGCGGCTTCCGCACTCTCTCCTACCTCGACGTCCGCGAGCCCAACCACTCCGATCTTAAAAAACTCATCTTCCACATGCTCTCCACCCGCCGCCAATTCGTCGTACCGGAATTTGTACACACTTTCAATCAATTATTCCAAACCATGGAATCCGATATAGAGAAATTCGGTAAAGCCGACTTCTCCGAGGCCAACAATCAGGCTTCGTTCAATTTCCTCATTCGCGCTTTGCTGGGCAAGGACCCGTTAGGATCCAAGCTCGGGTCTGATGGGCCGAAGCTCATTACGAAGTGGGTTCTGATTCAGCTCGGCCCGATCCTGACTTTGGGGTTCCCGAGCCTTTTGGAGGATTTGATCCTGCATTCCATCCGCCTGCCTTCCTTTTTGGTGAAGAAGGAGTACGAAAGGCTGGTGGATTTCTTTCTTACGGCGTCCGACCCGTTACTGGAGGAGGCGGACCGAATGGGCATAAGTAGGGAGGAGGCAATGCACAACATAATGTACACCATCTGCTTCAACGCATTTGGTGGTATGAACATAATGATGCCCAGCCTGATAAAGTGGATAGGTCGGGCCGGATCGGTCTTACACGGCAAACTAGCATCCGAGGTCCGAACCGTAGTGAAATCCAATGGTGGGGAAGTGACGATGAGAGGGATAGAGGAAATGGAGCTGGTGAAGTCGGTGGTGTACGAGGCGTTACGGATCGAGCCGCCCGTGCCGTTGCAGTACGGGCGGGCACGGCGGGACTTTCTGCTGGAGAGCCACGACGCGTGCTTTGAGGTTCGGGCTGGGGAGACGCTGTTCGGGTACCAACCGTTTGCGACCCGGGATGGACGGGTCTTTGATCGGGCCGAGGAGTTCGTTGGGGATAGGTTTGTTGGCCCGAAAGGGGAACGGCTGTTGAAGTACGTGCTTTGGAGCAACGGGAGGGAGACGGATACACCAACCGATAAAAATAAGCAGTGCGCGGGGAAGGATTTTGTGGTGATGGTGGCGAGGTTGATGGTGGTGGAGCTTTTTTTGAGGTACGATACCTTTCATATAGAGTGTGGGACGTCGCCTTTAGGGTCGTCGGTCAAGTTCACGTCCTTGAAGAGGGCTACTTTTTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010910500.1	1.8e-198	allene oxide synthase 1, chloroplastic
Swissprot	K4BV52.1	3.8e-182	Cytochrome P450 74A
trEMBL	A0A6I9QLG1	1.3e-198	allene oxide synthase 1, chloroplastic

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G42650.1	59.96	1e-171	599	AOS;CYP74A;DDE2	allene oxide synthase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g200205	AT5G42650.1	467	187	0	28	494	52	518	59.96	1e-171	599
g200205	AT4G15440.1	376	212	4	105	477	2	376	42.55	8e-83	304
g200205	AT1G74110.1	187	119	8	309	487	347	522	26.20	3e-06	50.4

Ortholog group

Species	Genes
Allium cepa	g200205.t1
Allium fistulosum	AfisC7G05785
Allium sativum	Asa3G00535.1
Arabidopsis thaliana	AT5G42650.1
Oryza sativa	LOC_Os03g55800.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	323	428	37.1	1.4e-09

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001101	P	response to acid chemical
GO:0008152	P	metabolic process
GO:0001676	P	long-chain fatty acid metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0050832	P	defense response to fungus
GO:0003824	F	catalytic activity
GO:0005739	C	mitochondrion
GO:0004497	F	monooxygenase activity
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006082	P	organic acid metabolic process
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006631	P	fatty acid metabolic process
GO:0006690	P	icosanoid metabolic process
GO:0006950	P	response to stress
GO:0008144	F	drug binding
GO:0008150	P	biological_process
GO:0008202	P	steroid metabolic process
GO:0009058	P	biosynthetic process
GO:0009507	C	chloroplast
GO:0009526	C	plastid envelope
GO:0009532	C	plastid stroma
GO:0009534	C	chloroplast thylakoid
GO:0009535	C	chloroplast thylakoid membrane
GO:0009536	C	plastid
GO:0009570	C	chloroplast stroma
GO:0009579	C	thylakoid
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0009611	P	response to wounding
GO:0051707	P	response to other organism
GO:0009620	P	response to fungus
GO:0009694	P	jasmonic acid metabolic process
GO:0009695	P	jasmonic acid biosynthetic process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009753	P	response to jasmonic acid
GO:0009941	C	chloroplast envelope
GO:0009978	F	allene oxide synthase activity
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010287	C	plastoglobule
GO:0010817	P	regulation of hormone levels
GO:0019825	F	oxygen binding
GO:0016053	P	organic acid biosynthetic process
GO:0016125	P	sterol metabolic process
GO:0016829	F	lyase activity
GO:0016835	F	carbon-oxygen lyase activity
GO:0016836	F	hydro-lyase activity
GO:0019369	P	arachidonic acid metabolic process
GO:0019373	P	epoxygenase P450 pathway
GO:0019752	P	carboxylic acid metabolic process
GO:0031407	P	oxylipin metabolic process
GO:0031967	C	organelle envelope
GO:0031975	C	envelope
GO:0031976	C	plastid thylakoid
GO:0031984	C	organelle subcompartment
GO:0032787	P	monocarboxylic acid metabolic process
GO:0033559	P	unsaturated fatty acid metabolic process
GO:0034357	C	photosynthetic membrane
GO:0036094	F	small molecule binding
GO:0042221	P	response to chemical
GO:0042445	P	hormone metabolic process
GO:0042446	P	hormone biosynthetic process
GO:0042651	C	thylakoid membrane
GO:0043207	P	response to external biotic stimulus
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043436	P	oxoacid metabolic process
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0044255	P	cellular lipid metabolic process
GO:0044281	P	small molecule metabolic process
GO:0044283	P	small molecule biosynthetic process
GO:0044422	C	organelle part
GO:0044424	C	intracellular part
GO:0044434	C	chloroplast part
GO:0044435	C	plastid part
GO:0044436	C	thylakoid part
GO:0044444	C	cytoplasmic part
GO:0044446	C	intracellular organelle part
GO:0044464	C	cell part
GO:0046394	P	carboxylic acid biosynthetic process
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0055035	C	plastid thylakoid membrane
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:0072330	P	monocarboxylic acid biosynthetic process
GO:0098542	P	defense response to other organism
GO:1901360	P	organic cyclic compound metabolic process
GO:1901568	P	fatty acid derivative metabolic process
GO:1901576	P	organic substance biosynthetic process
GO:1901615	P	organic hydroxy compound metabolic process
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K01723	AOS; hydroperoxide dehydratase	EC:4.2.1.92	alpha-Linolenic acid metabolism	ko00592

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network