Detail information of g200412


Location
GeneChrStartEndStrand
g200412Scaffold_50976:HRSCAF_43406254946191-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263838.13.5e-37two-component response regulator ORR5-like
SwissprotQ2HWH1.14.7e-39Type A response regulator 5
trEMBLA0A8J5GQK33.3e-37Response regulatory domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G59940.153.731e-32 134ARR3response regulator 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag200412.t1; g21381.t1; g247569.t1; g247576.t1; g247583.t1; g247584.t1; g492859.t1
Allium fistulosumAfisC1G00349; AfisC1G05319; AfisC2G00419; AfisC3G00408; AfisC3G02840; AfisC3G03917; AfisC5G00191; AfisC5G03886; AfisC5G03889; AfisC5G03890; AfisC5G03898; AfisC5G05718; AfisC5G06137
Allium sativumAsa2G05837.1
Arabidopsis thalianaAT2G07440.1; AT3G48100.1; AT5G62920.1
Oryza sativaLOC_Os02g42060.1; LOC_Os02g58350.1; LOC_Os04g44280.1; LOC_Os04g57720.1; LOC_Os07g26720.1; LOC_Os07g26720.2; LOC_Os08g26990.1; LOC_Os08g28900.1; LOC_Os08g28950.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00072.21Response_regDomain1011990.37.8e-26

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14492ARR-A; two-component response regulator ARR-A familyEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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