result

Gene information

Detail information of g205444

Location

Gene	Chr	Start	End	Strand
g205444	CHR8	54115407	54116948	-

Sequences

CDS

Protein

Gene

>g205444.t1
ATGGCATGCAGCTGCATGGTGACTAGAAGGCAGGAGAAAGCTACAAGCTTTGTGAGGTAATGCACGGTGATCTAGAAAGTGATGTAAGCTACAGGCAAGTTTCTAATCACAAATGCCCTAATTCCTCGCATCTTCGGACAAGGAGCAATGTTATCGACCCATTCTTCCTCGATCTGTTTGAATCGTTCACCCTCAACATGTTTAATTGCGGAAGACTAGAATTAAACCTGTTTAGTTGATGGAGAGAAAGGAAAACATGACTTCAATTTCAGATTTGATCATCTCCAAAATTTTCAGGTGGCTTCTTTTACTGGGAATATTTTAAGTTATCATTTTCATTTTCTACTGATTCCTATGGCGACATATCTGTTAAATATGTAAATCACTTTGTTATCATTGCTTCATGCCACAGATTATAGTAGTGAATCAAAAATACTTGATACAATCAATGTATGTTAGTAACATAGAATAGCCATCAATCTTCTAACCTTGTTTCCCCATATGAAAAAAAGAGCGGTTGTAAAAATCATCAATTATTGGTTTCCATTTGCATAGATACGGTATGAGACATTAGCAAATAGCTGAAGCCGTTGTTATCAAAGTTAGTTATATAAACTAAAACATTTCCAGAGCAACTATTTTGACATTAAATTTTATATAGGAATCATTCAAGTTATAACAAGTTGGAACAACTGTTTATTATTATAATTAAGCTGTGGTTTGAACTTTCAGTCTGAAGTGTGTTTTAACTTAAGAAATTGGCCACAATTTGACGTGCTTAATAAATATGAAAAATATAATATTCAGGTGTTATTAACCCCTACACATCTTGCAATAGTAATGGAGTACGCCGCTAGTGGTGAACTGTTTAAGAGAATATGCACCGTTAGAAGATTCAGTGAAGATGAGGTAGAAACACAATAATGATATTGAACTAAACTTATCAAATTATATTCATTCTTTTGAAATATTAATGAATATGCATTTATATGATGTGTGATAGGCAAGGTTTTACTTTCAACAATTAATATCAGGAGTCAGCTATTGTCATTCCATGGTAATTAATTTTCTTATGGTGTCATAGAATCTCTGATCAAGATACTTTAACCTACAGAAGCACTGTGTATTCCTGCCCAAGTAAAAGTATTTATAACATGCATCATTGAATTAGTTTAGTTATTTGTTATGATTTTTTATAATGCAGCAAACTTTGTCATAGAGATCTGAAGCTAGAAAACACTCTTTTGGATGGAAGCACGTCTCCTCGCCTTAAAATTTGCGATTTTGGCTACTCGAAGGTAGAATTGCTTTTCTATTAATGCAAAATGTTATCATTCATTCATACCAGGCATGTGACTGATTGAACTTAAACTGTGCAATTATTCACACTGGTTAATTTTCAATGATTGACAAGTCTAGCTAGTACTACACTAAAATGGAATAATCTATTATTATTATTATTTACAGTCATCTGAGATACATTCACAACCAAAATCAACTGTGGGAACACCAGCCTACATAGCTCCTGAGGTTGCTTTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	OEL30185.1	5.8e-21	Serine/threonine-protein kinase SAPK10
Swissprot	Q75V57.1	3.0e-22	stress-activated protein kinase 9
trEMBL	A0A1E5VYJ6	4.2e-21	Serine/threonine-protein kinase SAPK10

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G33950.1	88.68	3e-24	106	ATOST1;OST1;P44;SNRK2-6;SNRK2.6;SRK2E	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
g205444	AT4G33950.2	53	6	20	72	87	139	88.68	3e-24	106
g205444	AT4G33950.1	53	6	20	72	135	187	88.68	3e-24	106
g205444	AT2G23030.1	53	7	20	72	118	170	86.79	6e-24	105

Ortholog group

Species	Genes
Allium cepa	g205444.t1; g427185.t1; g478392.t1; g495980.t1
Allium fistulosum	AfisC1G05963; AfisC1G05976; AfisC1G08142; AfisC3G03939
Allium sativum	Asa3G02761.1; Asa3G02768.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	19	72	54.9	7.4e-15

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001101	P	response to acid chemical
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006970	P	response to osmotic stress
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0009628	P	response to abiotic stimulus
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009737	P	response to abscisic acid
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009755	P	hormone-mediated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009845	P	seed germination
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032870	P	cellular response to hormone stimulus
GO:0033993	P	response to lipid
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071215	P	cellular response to abscisic acid stimulus
GO:0071229	P	cellular response to acid chemical
GO:0071310	P	cellular response to organic substance
GO:0071396	P	cellular response to lipid
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0080167	P	response to karrikin
GO:0090351	P	seedling development
GO:0097305	P	response to alcohol
GO:0097306	P	cellular response to alcohol
GO:1901564	P	organonitrogen compound metabolic process
GO:1901700	P	response to oxygen-containing compound
GO:1901701	P	cellular response to oxygen-containing compound
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K02991	RP-S6e, RPS6; small subunit ribosomal protein S6e	EC:-	Ribosome	ko03010
			Apelin signaling pathway	ko04371
			HIF-1 signaling pathway	ko04066
			PI3K-Akt signaling pathway	ko04151
			mTOR signaling pathway	ko04150
			Insulin signaling pathway	ko04910
			Thermogenesis	ko04714
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network