result

Gene information

Detail information of g206383


Location
GeneChrStartEndStrand
g206383Scaffold_51715:HRSCAF_434801487638520727-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010913196.13.1e-190BTB/POZ domain-containing protein At2g04740 isoform X2
SwissprotQ9SJ85.25.7e-173BTB/POZ domain-containing protein At2g04740
trEMBLA0A6I9QQG12.2e-190BTB/POZ domain-containing protein At2g04740 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G04740.164.321e-172 603ankyrin repeat family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag206383.t1
Allium fistulosumAfisC1G00746
Allium sativumAsa7G00406.1
Arabidopsis thalianaAT2G04740.1
Oryza sativaLOC_Os06g21330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00651.28BTBDomain21331355.64.7e-15
PF00651.28BTBDomain36447560.61.4e-16

Gene Ontology
AccessionOntologyName
GO:0000151Cubiquitin ligase complex
GO:0005515Fprotein binding
GO:0019941Pmodification-dependent protein catabolic process
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0005488Fbinding
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0006508Pproteolysis
GO:0051603Pproteolysis involved in cellular protein catabolic process
GO:0006511Pubiquitin-dependent protein catabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0008150Pbiological_process
GO:0009056Pcatabolic process
GO:0009057Pmacromolecule catabolic process
GO:0019005CSCF ubiquitin ligase complex
GO:0009987Pcellular process
GO:0010498Pproteasomal protein catabolic process
GO:0019899Fenzyme binding
GO:0019222Pregulation of metabolic process
GO:0019538Pprotein metabolic process
GO:0030162Pregulation of proteolysis
GO:0030163Pprotein catabolic process
GO:0031461Ccullin-RING ubiquitin ligase complex
GO:0031625Fubiquitin protein ligase binding
GO:0032991Cmacromolecular complex
GO:0043161Pproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043170Pmacromolecule metabolic process
GO:0043632Pmodification-dependent macromolecule catabolic process
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044248Pcellular catabolic process
GO:0044257Pcellular protein catabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044265Pcellular macromolecule catabolic process
GO:0044267Pcellular protein metabolic process
GO:0044389Fubiquitin-like protein ligase binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0080090Pregulation of primary metabolic process
GO:1901564Porganonitrogen compound metabolic process
GO:1901565Porganonitrogen compound catabolic process
GO:1901575Porganic substance catabolic process
GO:1902494Ccatalytic complex
GO:1990234Ctransferase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10520ABTB1, BPOZ; ankyrin repeat and BTB/POZ domain-containing protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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