result

Gene information

Detail information of g207286

Location

Gene	Chr	Start	End	Strand
g207286	CHR1	301813048	301814026	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	PKA58982.1	1.4e-65	Heat shock factor protein HSF30
Swissprot	P41152.1	1.1e-56	Heat stress transcription factor
trEMBL	A0A2I0ATY0	1.0e-65	Heat shock factor protein HSF30

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G26150.1	48.45	2e-65	246	ATHSFA2;HSFA2	heat shock transcription factor A2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g207286	AT2G26150.1	258	116	4	24	267	33	287	48.45	2e-65	246
g207286	AT3G22830.1	224	92	3	24	226	50	272	49.11	3e-58	221
g207286	AT3G51910.1	205	89	3	25	222	19	216	49.76	5e-56	214

Ortholog group

Species	Genes
Allium cepa	g207286.t1
Allium fistulosum	AfisC1G01527
Allium sativum	Asa7G01432.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	36	125	107.8	2.9e-31

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000302	P	response to reactive oxygen species
GO:0001067	F	regulatory region nucleic acid binding
GO:0001666	P	response to hypoxia
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006986	P	response to unfolded protein
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006950	P	response to stress
GO:0006979	P	response to oxidative stress
GO:0008150	P	biological_process
GO:0009266	P	response to temperature stimulus
GO:0009314	P	response to radiation
GO:0042493	P	response to drug
GO:0009636	P	response to toxic substance
GO:0009408	P	response to heat
GO:0009416	P	response to light stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009642	P	response to light intensity
GO:0009644	P	response to high light intensity
GO:0009889	P	regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009893	P	positive regulation of metabolic process
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010035	P	response to inorganic substance
GO:0010200	P	response to chitin
GO:0010243	P	response to organonitrogen compound
GO:0010286	P	heat acclimation
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010557	P	positive regulation of macromolecule biosynthetic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010628	P	positive regulation of gene expression
GO:0044212	F	transcription regulatory region DNA binding
GO:0045935	P	positive regulation of nucleobase-containing compound metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046677	P	response to antibiotic
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0033554	P	cellular response to stress
GO:0070887	P	cellular response to chemical stimulus
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0034605	P	cellular response to heat
GO:0034620	P	cellular response to unfolded protein
GO:0035966	P	response to topologically incorrect protein
GO:0035967	P	cellular response to topologically incorrect protein
GO:0036293	P	response to decreased oxygen levels
GO:0036294	P	cellular response to decreased oxygen levels
GO:0042221	P	response to chemical
GO:0042542	P	response to hydrogen peroxide
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051254	P	positive regulation of RNA metabolic process
GO:0051716	P	cellular response to stimulus
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0070482	P	response to oxygen levels
GO:0071310	P	cellular response to organic substance
GO:0071453	P	cellular response to oxygen levels
GO:0071456	P	cellular response to hypoxia
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1901698	P	response to nitrogen compound
GO:1901700	P	response to oxygen-containing compound
GO:1902680	P	positive regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network