Detail information of g212939


Location
GeneChrStartEndStrand
g212939Scaffold_52540:HRSCAF_435626244989251170-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020277297.10.0e+00protein GFS12 isoform X2
SwissprotF4JY12.16.4e-296GREEN FLUORESCENT SEED 12
trEMBLA0A8B8ZM900.0e+00protein GFS12 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G18525.154.530.01035protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag212939.t1
Allium fistulosumAfisC1G09063
Allium sativumAsa7G06794.1
Arabidopsis thalianaAT5G18525.1
Oryza sativaLOC_Os01g22390.2; LOC_Os01g22390.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain14327835.56e-09
PF02138.15BeachFamily282490144.43.9e-42

Gene Ontology
AccessionOntologyName
GO:0000151Cubiquitin ligase complex
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0002376Pimmune system process
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0008104Pprotein localization
GO:0005623Ccell
GO:0006605Pprotein targeting
GO:0006623Pprotein targeting to vacuole
GO:0006810Ptransport
GO:0006886Pintracellular protein transport
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0007034Pvacuolar transport
GO:0008150Pbiological_process
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009814Pdefense response, incompatible interaction
GO:0009816Pdefense response to bacterium, incompatible interaction
GO:0015031Pprotein transport
GO:0015833Ppeptide transport
GO:0031461Ccullin-RING ubiquitin ligase complex
GO:0032991Cmacromolecular complex
GO:0033036Pmacromolecule localization
GO:0033365Pprotein localization to organelle
GO:0034613Pcellular protein localization
GO:0042886Pamide transport
GO:0043207Presponse to external biotic stimulus
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0045184Pestablishment of protein localization
GO:0046907Pintracellular transport
GO:0050896Presponse to stimulus
GO:0051179Plocalization
GO:0051234Pestablishment of localization
GO:0051641Pcellular localization
GO:0051649Pestablishment of localization in cell
GO:0051704Pmulti-organism process
GO:0070727Pcellular macromolecule localization
GO:0071702Porganic substance transport
GO:0071705Pnitrogen compound transport
GO:0072594Pestablishment of protein localization to organelle
GO:0072665Pprotein localization to vacuole
GO:0072666Pestablishment of protein localization to vacuole
GO:0080008CCul4-RING E3 ubiquitin ligase complex
GO:0098542Pdefense response to other organism
GO:1902494Ccatalytic complex
GO:1990234Ctransferase complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17601WDR81; WD repeat-containing protein 81EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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