Detail information of g217483


Location
GeneChrStartEndStrand
g217483CHR6254305385254330292+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247808.19.2e-260serine/threonine-protein kinase tricorner-like
SwissprotQ9Y2H1.31.7e-117Nuclear Dbf2-related kinase 2
trEMBLA0A5P1E4036.6e-260Serine/threonine-protein kinase tricorner-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G20470.175.190.0 810AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag217483.t1; g309728.t1; g404442.t1; g405806.t1
Allium fistulosumAfisC1G02411; AfisC3G04057; AfisC5G06871; AfisC6G00995
Allium sativumAsa0G05451.1; Asa0G05452.1; Asa7G05041.1; Asa8G05326.1
Arabidopsis thalianaAT1G03920.1; AT1G30640.1; AT2G20470.1; AT3G23310.1; AT4G14350.1; AT4G14350.2; AT4G14350.3
Oryza sativaLOC_Os05g43570.1; LOC_Os05g43570.2; LOC_Os05g43570.3; LOC_Os10g33640.1; LOC_Os12g19290.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain301599215.57.6e-64
PF00433.21Pkinase_CFamily61866227.34e-06

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08790STK38, NDR; serine/threonine kinase 38EC:2.7.11.1 --
K20069NECAP1_2; adaptin ear-binding coat-associated protein 1/2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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