result

Gene information

Detail information of g220069

Location

Gene	Chr	Start	End	Strand
g220069	Scaffold_53533:HRSCAF_436619	280818	284175	+

Sequences

CDS

>g220069.t1
ATGAAAGACGGTGAAAACAATATGGTACTAACACAGGAAAGTGAACGGCTAGTTGTATTTGTGGAAGAACCTGTCGTGGAGGAGAGTGCCGATATTGAATTTGACATTCACCGATGTAGTAATAGTAAAGAAGCGAAACAGAGTCCGGATAATTTGGAAAATAATAAGGATATTGAAAGCGATAATGAAGTTGACAAATCCAAAGAAATCGAAAGCGATGAAGATAAAGAACAAGTTAAAACGGACATTGAAATGTCTTTGTCCGACTATCCTGATTTAACATCAGAATTCAGTACTGACAGGATTTTTGAGTCGAAGGATCAAGTTCGAGATTGGTGCATTAACCGAGGGTTAGGTTGTAAGTGTGTTATTGTTACCAAAAGAAGTAGAATGAAAAATGTACATGGGAATGGAAAAGGCTCGAGGATGGATTTAGTATGTGAAAGAAGTGGTCAATATGTTGATCATAAGTCGAAGAATTATGTTCCAATATCTTCCAAAAAAAAAAGAAGAACAGGTAGTAGAAAATGTGACTGTCCTTTTGAGTTACATGCACATTGTAGATGTGATGGGACGTGGATACTGACTGTAAAGAATGGGCGTCACAATCATACACTTCCAAACGTTTTAACCGGTCATCCTTTTGTCGCGAGACTCAACGAAGACGAAGTCAAGACTGTTGCAACAATGACTAATAGTGGAGTTAAACCTCGAAATATTTTAACCGCTATTAGAATTGACAATCCTTCCAACCAATCAACCATTCGAACTGTGTACAATGCCAAAATCAAACTTAAAATGTGCAATACAGAAGGTAGATCCGTTATGCAACAATTTATGAAATTGGCATCTACCAATAATTATACCGTATATCAAAGAGTTGATGAACAAAGCAATGAAATCACCGACTTATTTTTCAGCCATCCTAGATGTGTAGTGCTTGCTCAATGTTTTTATCAAATTTTGTTCTTGGATTGTACTTTCAAGACCAATAGGTATAAGTTACCTTGTTTCCATATGGTTTCACAGACATCGACAGGGGCTACGTTTACTGTTGCATTAGCATTTCTAAGTCGTGAGACAACGGATTCCTATAAATGGGCTCTTGAATGTGTGCGGAAGTGTTACAGGGATAATGAAGTGCCAGGGGTTATCATCACCGATGCAGAAATCGCTTTAATAAATGCCGTCGCAAATGTGTTTCCAGCATCATATCATATCCTTTGTGCCTGGCATATATCTAAGAATGTGATGGCAAATTGTAAACCAAATTTTATACAAAGGAAGAGAGTAATAATTGGTGAAAAAGAAGTCGTTGTGGAGGATGATGAAGGAAAAAAGGAATACGAAAGTTTTTGGGAAGGATGGACAAATGTGATAAATTCGTTGTCTGTAGAAGAGTACCACAGAAATTTAAACTCTTTTCGTGATAAATGGATAGAAATCATTGCGTTGAAAAATAGGTATGAAGAATCTCCGGATAACGTTCGACTTGTTATCCAACAACAGTTAAAATCAATTGCTTTCCCACAAACAACTGCTGTTTTAGAACCACCGGTGGCTACTATCAAAAAAGGCAGACCATCCAAAAAGGAACAATCCACCAAACGAGAACTTTCACACTTTGAACATGTTGAAGCGTCATTGTCATCTAGCTCAAACCTCACACCTTGCGGCAGATATTTGAAGAAGCTTGGCATAAAAACGAAGGCGTCACCATCCAAAAAATTTGATGGCGAGTATTTGTGGCAATTGCCCAAACATATAAGAGCTTACATACTCAGTATAGACGATGTGCCTAGGGACGGTGATTGTGGTTATTGGGTCGTCGTTAAACAATTGAATCTTCAAAATAGACGACCATCAAATCCCTGCAAGTTTGTTCGTGAGTCTATGGTTGACAATTTGACTGTTAATGCTGAGATGTACCGTAATATGTGGGATGACTGTGGATACGACGAAATGATGAATAGGATACAAAATCCTGAGTGGATGCAGATGCCCGAATCAGGATATATAATAGCAGAAACATTTGGCACCGTGGTAGTGTTGATAAGTAATCTCATGTCCTGCACTTTTGTTCCCACCACGGTACGGATGAATTTGTTGAACGAAAATAGAATAGTGGTTATGGGACATGTAGACAACTCGCATTATGTTGGTCTTACACTAACACCAAATTCTCCTATCCCTCCAACACCACAATTCGGATATTTTCAACGACTTTATAATATCAATGCCGAAGACTGGATCAAACCATATGTGGAACGTATCAACAAATGGTTAGTTTACATGAATGATGGCGAAAAAGAAGAGCAGACTACGGCAGTAGACTTAACTAGCGTGTAA

Protein

Gene

>g220069.t1
ATGAAAGACGGTGAAAACAATATGGTACTAACACAGGAAAGTGAACGGCTAGTTGTATTTGTGGAAGAACCTGTCGTGGAGGAGGTAATTTTTTTTTTTTTAATTCCATCGTTTTACTGTAGCAGGTATTTCGTTCGGCGGTAGCGTGCCGTGCAACCCAGTTGGCAGATTTAAATTTGTTATATACGGTCATGCTATGCCTTTTTTAATGCATATATCGGCTGGTTCTAGCCGATTACATCGTAAAACGTATATATTTTTATATTCGGCAAGAGTCGGCCGATTTGATGATTGTTTAACGGTGGGATGTTGCCGACTATTATGGTGAAAATAGTAAACTTGTTTATGACTAGCAAATATCGTTTCAGAAGTCATTGTACGGCATGTTATCGCCGTACGCTACCAGCTTCTACCGTTATAAAATACAATATTATTCTGCCGTTATATTATTATTTTTTTCAAACAGAGTGCCGATATTGAATTTGACATTCACCGATGTAGTAATAGTAAAGAAGCGAAACAGAGTCCGGATAATTTGGAAAATAATAAGGATATTGAAAGCGATAATGAAGTTGACAAATCCAAAGAAATCGAAAGCGATGAAGATAAAGAACAAGTTAAAACGGACATTGAAATGTCTTTGTCCGACTATCCTGATTTAACATCAGAATTCAGTACTGACAGGGTATGTATTAATGTGTCAATAGTTTTTGTTGATTTTTTTGTGTACATGACACAATACTGTTGTTTCAGATTTTTGAGTCGAAGGATCAAGTTCGAGATTGGTGCATTAACCGAGGGTTAGGTTGTAAGTGTGTTATTGTTACCAAAAGAAGTAGAATGAAAAATGTACATGGGAATGGAAAAGGCTCGAGGATGGATTTAGTATGTGAAAGAAGTGGTCAATATGTTGATCATAAGTCGAAGAATTATGTTCCAATATCTTCCAAAAAAAAAAGAAGAACAGGTAGTAGAAAATGTGACTGTCCTTTTGAGTTACATGCACATTGTAGATGTGATGGGACGTGGATACTGACTGTAAAGAATGGGCGTCACAATCATACACTTCCAAACGTTTTAACCGGTCATCCTTTTGTCGCGAGACTCAACGAAGACGAAGTCAAGACTGTTGCAACAATGACTAATAGTGGAGTTAAACCTCGAAATATTTTAACCGCTATTAGAATTGACAATCCTTCCAACCAATCAACCATTCGAACTGTGTACAATGCCAAAATCAAACTTAAAATGTGCAATACAGAAGGTAGATCCGTTATGCAACAATTTATGAAATTGGCATCTACCAATAATTATACCGTATATCAAAGAGTTGATGAACAAAGCAATGAAATCACCGACTTATTTTTCAGCCATCCTAGATGTGTAGTGCTTGCTCAATGTTTTTATCAAATTTTGTTCTTGGATTGTACTTTCAAGACCAATAGGTATAAGTTACCTTGTTTCCATATGGTTTCACAGACATCGACAGGGGCTACGTTTACTGTTGCATTAGCATTTCTAAGTCGTGAGACAACGGATTCCTATAAATGGGCTCTTGAATGTGTGCGGAAGTGTTACAGGGATAATGAAGTGCCAGGGGTTATCATCACCGATGCAGAAATCGCTTTAATAAATGCCGTCGCAAATGTGTTTCCAGCATCATATCATATCCTTTGTGCCTGGCATATATCTAAGAATGTGATGGCAAATTGTAAACCAAATTTTATACAAAGGAAGAGAGTAATAATTGGTGAAAAAGAAGTCGTTGTGGAGGATGATGAAGGAAAAAAGGAATACGAAAGTTTTTGGGAAGGATGGACAAATGTGATAAATTCGTTGTCTGTAGAAGAGTACCACAGAAATTTAAACTCTTTTCGTGATAAATGGATAGGTAAGCATAAAAAATCTGTCACTTATGTCCTCAAAAATTGGCTAACAAAGTACAAGGAGATGTTTGTTATGGCTTGGACAAACAAAATTAAACACTACGATAATGTGTCTACCAGCATTGTTGAAAGTGCCCACTATCGTCTAAAATTGTATTTTAATTCGGCCGCTGGTAGTTTTGTTCAATGTTGGAGTAGTGCACATCTATGTTGTGAGAATGAACTAGTTGCCATCGAGCATGCATTCGAAACAAGTACGTCTAAAAACAATGCATCGATTTAGAATCGAACCAATGTTTAAAGAGTTATTGGGGAATGTATCGCATAAAGCATTGGATTTAATACTAACTGAACTAAAAAGTGTGTCAACTGTTGGTATGACAATCGACCAATGTGGTTGTGTGTTATGGAAAGTTAACGGATTACCATGTGCACATATGCTTGTAGATTTTAGACACACCCACGGTTTCATCCCCCTATCCGTTGTTGACTCTTACTGGAAGCAGTTGTCATGTATTCCACCAATTGTGCATCGTTCCACGTTTGCATTTTTCGATTTGCCAGAAATCATTGCGTTGAAAAATAGGTATGAAGAATCTCCGGATAACGTTCGACTTGTTATCCAACAACAGTTAAAATCAATTGCTTTCCCACAAACAACTGCTGTTTTAGAACCACCGGTGGCTACTATCAAAAAAGGCAGACCATCCAAAAAGGAACAATCCACCAAACGAGAACTTTCACACTTTGAACATGTTGAAGCGTCATTGTCATCTAGCTCAAACCTCACACCTTGCGGCAGATATTTGAAGAAGCTTGGCATAAAAACGAAGGCGTCACCATCCAAAAAATTTGATGGCGAGTATTTGTGGCAATTGCCCAAACATATAAGAGCTTACATACTCAGTATAGACGATGTGCCTAGGGACGGTGATTGTGGTTATTGGGTCGTCGTTAAACAATTGAATCTTCAAAATAGACGACCATCAAATCCCTGCAAGTTTGTTCGTGAGTCTATGGTTGACAATTTGACTGTTAATGCTGAGATGTACCGTAATATGTGGGATGACTGTGGATACGACGAAATGATGAATAGGATACAAAATCCTGAGTGGATGCAGATGCCCGAATCAGGATATATAATAGCAGAAACATTTGGCACCGTGGTAGTGTTGATAAGTAATCTCATGTCCTGCACTTTTGTTCCCACCACGGTACGGATGAATTTGTTGAACGAAAATAGAATAGTGGTTATGGGACATGTAGACAACTCGCATTATGTTGGTCTTACACTAACACCAAATTCTCCTATCCCTCCAACACCACAATTCGGATATTTTCAACGACTTTATAATATCAATGCCGAAGACTGGATCAAACCATATGTGGAACGTATCAACAAATGGTTAGTTTACATGAATGATGGCGAAAAAGAAGAGCAGACTACGGCAGTAGACTTAACTAGCGTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026459737.1	2.2e-94	uncharacterized protein LOC113360443
trEMBL	A0A200QUY7	1.1e-82	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G22170.1	20.83	1e-12	72.4	CPD45;FHY3	far-red elongated hypocotyls 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g220069	AT3G22170.2	408	278	14	31	420	2	382	20.83	1e-12	72.4
g220069	AT3G22170.1	408	278	14	31	420	2	382	20.83	1e-12	72.4
g220069	AT4G38180.1	268	199	5	168	427	140	404	21.64	6e-12	70.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	127	206	22.9	9.6e-05
PF10551.6	MULE	Domain	321	416	97.0	6.2e-28

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network