Detail information of g221943


Location
GeneChrStartEndStrand
g221943Scaffold_53768:HRSCAF_436854249778251169+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250541.18.4e-23F-box protein At5g49610-like
SwissprotQ9FZF8.11.9e-08Putative F-box protein At1g47790
trEMBLA0A5P1EY771.6e-20F-box domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G47790.123.904e-0856.2F-box and associated interaction domains-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag221943.t1; g28300.t1; g305880.t1; g310930.t1; g339215.t1; g42107.t1; g421663.t1; g447305.t1; g467029.t1; g8069.t1; g8075.t1; g89566.t1
Allium fistulosumAfisC2G05979; AfisC4G06983; AfisC5G00048; AfisC5G00854; AfisC5G06479; AfisC5G06481; AfisC5G06485; AfisC5G06486; AfisC5G06491; AfisC5G06495; AfisC5G06497; AfisC5G06503; AfisC5G06511; AfisC5G06512; AfisC7G00910; AfisC7G00918
Allium sativumAsa0G00181.1; Asa0G01752.1; Asa4G00028.1; Asa4G04134.1; Asa4G04984.1; Asa4G04987.1; Asa4G04990.1; Asa4G05007.1; Asa6G06258.1; Asa6G06296.1; Asa6G06371.1; Asa6G06638.1; Asa7G04096.1; Asa7G04097.1; Asa7G04275.1; Asa7G04276.1; Asa7G04277.1; Asa7G04278.1; Asa7G04279.1
Arabidopsis thalianaAT3G25550.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.