result

Gene information

Detail information of g223304


Location
GeneChrStartEndStrand
g223304Scaffold_53939:HRSCAF_43702511999661209273-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRRT65347.11.9e-59hypothetical protein B296_00006499
SwissprotQ8H0V5.12.9e-49Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
trEMBLA0A426ZMX81.3e-59Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G11270.157.954e-55 212OCP3overexpressor of cationic peroxidase 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag223304.t1
Allium fistulosumAfisC7G02857
Allium sativumAsa8G00296.1; Asa8G00302.1
Arabidopsis thalianaAT5G11270.1
Oryza sativaLOC_Os06g39906.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain30435022.09.7e-05

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0002229Pdefense response to oomycetes
GO:0002239Presponse to oomycetes
GO:0002376Pimmune system process
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0050832Pdefense response to fungus
GO:0007165Psignal transduction
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0009414Presponse to water deprivation
GO:0009415Presponse to water
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009620Presponse to fungus
GO:0009628Presponse to abiotic stimulus
GO:0009682Pinduced systemic resistance
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009753Presponse to jasmonic acid
GO:0009755Phormone-mediated signaling pathway
GO:0009787Pregulation of abscisic acid-activated signaling pathway
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009966Pregulation of signal transduction
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010118Pstomatal movement
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010646Pregulation of cell communication
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0023051Pregulation of signaling
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031347Pregulation of defense response
GO:0032870Pcellular response to hormone stimulus
GO:0032879Pregulation of localization
GO:0033993Presponse to lipid
GO:0042221Presponse to chemical
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0048583Pregulation of response to stimulus
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071395Pcellular response to jasmonic acid stimulus
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:0080134Pregulation of response to stress
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:0098542Pdefense response to other organism
GO:1901419Pregulation of response to alcohol
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000022Pregulation of jasmonic acid mediated signaling pathway
GO:2000071Pregulation of defense response by callose deposition
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905957

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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