result

Gene information

Detail information of g229292

Location

Gene	Chr	Start	End	Strand
g229292	Scaffold_54700:HRSCAF_437786	53893	55461	-

Sequences

CDS

Protein

Gene

>g229292.t1
ATGAAGAGAAGCGAAGCAGAATGGGAACAACTTCTTCATGTATATCCATTTCTTCTTCTCATTCATACAAATATATGTTGTATGTTGTTATATGATTATATCTATGTGACCTAGTTTTTATATTTCAAATCATATGTAACAGGCTATGAATAACAATATAAGTGGAGTGCCAGGAGGTAGACATAGAGCTGCTTTGTCCAGGGATTTATTGTCAACTCCAAAGCAACAATACTCGAGCATTCCAGGTACAATGGAGTCACAGTCTTCTTTGTGTAGCATGAAGATATAAGCTTTTCTTTAGTTAAAATATACTCTATCTTCTTTTATTAAGCTTTGTTATATTAAAAAAAAAAAAAAGGAAGAGTCCTGTTGATATGGCTTCCAGATCAGAAAGATACAGTTGTCTAAATCAGCTGATAAATTCTTTTTTGATTTTTTTTAATCTTGGTAGAGGATGATTCAATTTCTTTGTTCATGCATGTTGTAGAAATTCACATGTGGAATGATTTAGAAAACTGCTGATATATCTTGTATTTGGTCGATAGCCTTTGTTATAATGCATTCGAATGATTGTTTTTTCTCTCTCTTTTCTTTTCTTTCTATTTGGCTAAATTCAATACAAAACTTCAGCTGTAAACTGCAAGCCAACTAATGTGATAGGTGCAAAGAAAGCCAAATTAGCAGGTGGATGCAGAGTTACTAGCGGTTCTGATGGCCAATCTGATGACAACGATGATGAACTTTTTGAATTCGAAAATGGATCATCTGATCCTAACATCATCGACATAAAACGCATGAGAAGGTATATAATATATTTTCTACACATTTACGTTGAATAAAATATATCTGATGTTTCTTTCTAAATTTAAGTAACATGGCTGCAATTTTATTATATTGAAGGATGATTTCAAACCGTGAATCTGCCAGACGATCAAGAACGAGGAAGCAAGCTCAACAAATAGATCTTGAACTACAGGTCATAAAAAAGAGATCTTATCATTGTGTTATGCATACACAACATCCTAAAAGTTACATGTTTATAACTTTATACACAGAATAAAACATTTCACATATTATCATATACATGTTACCAGGTTGATCAACTAAGAGGAGAAAGTGCAGCACTATACAAACAATTCACAGATGCTAACCACCAATTCACGGTTGCAGTTAACGACAACAGAGTACTCAAATCAAATGTAGAAGCCATTAGAATCAAGGTAACAGTTTTCCATTTACTGAAAAATGATTCGAATAGGTAGTGAATAAAATATATGTATATATATAATGCATGAAACAAATGTACAGGTAAAGATGGCTGAAGATATGCTGACTAGAGGTTCTTTACCGTGTGGCCTCGATATGGTAGACATGAATATCATGGATCAAATACAAGAAAATGGAGGGTGTATTGGTAATTTTCAAGGGGGTGATATGGGTGTGGGTATGAATGCTGGCTTTGACAATTTGCAGAGTGTGATTTCAAGCGAGATGACGAGCTGCGAAACCGATGTTTGGTCCTGGGGTTCTCCTACTGCTGATGTTATATCCAAGCCGCAAATTATCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269862.1	1.1e-36	basic leucine zipper 9
Swissprot	Q6ETX0.1	3.3e-33	bZIP transcription factor 20
trEMBL	A0A835Q581	4.5e-35	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G24800.1	42.72	8e-31	130	ATBZIP9;BZIP9;BZO2H2	basic leucine zipper 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g229292	AT5G24800.1	206	88	8	49	232	79	276	42.72	8e-31	130
g229292	AT4G02640.2	147	76	3	29	172	160	304	44.90	3e-15	79.0
g229292	AT4G02640.1	130	65	2	44	172	171	298	47.69	3e-15	78.6

Ortholog group

Species	Genes
Allium cepa	g229292.t1
Allium fistulosum	AfisC3G08446
Allium sativum	Asa2G06963.1
Arabidopsis thaliana	AT5G24800.1
Oryza sativa	LOC_Os02g07840.1; LOC_Os02g07840.2; LOC_Os02g16680.1; LOC_Os02g16680.2; LOC_Os06g45140.1; LOC_Os06g45140.2; LOC_Os06g45140.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	90	134	48.0	9e-13

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001678	P	cellular glucose homeostasis
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0009743	P	response to carbohydrate
GO:0009746	P	response to hexose
GO:0009749	P	response to glucose
GO:0009889	P	regulation of biosynthetic process
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019725	P	cellular homeostasis
GO:0070887	P	cellular response to chemical stimulus
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0033500	P	carbohydrate homeostasis
GO:0034284	P	response to monosaccharide
GO:0042221	P	response to chemical
GO:0042592	P	homeostatic process
GO:0042593	P	glucose homeostasis
GO:0042803	F	protein homodimerization activity
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0046982	F	protein heterodimerization activity
GO:0048878	P	chemical homeostasis
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051716	P	cellular response to stimulus
GO:0055082	P	cellular chemical homeostasis
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071310	P	cellular response to organic substance
GO:0071322	P	cellular response to carbohydrate stimulus
GO:0071326	P	cellular response to monosaccharide stimulus
GO:0071331	P	cellular response to hexose stimulus
GO:0071333	P	cellular response to glucose stimulus
GO:0080090	P	regulation of primary metabolic process
GO:1901700	P	response to oxygen-containing compound
GO:1901701	P	cellular response to oxygen-containing compound
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network