Detail information of g234623


Location
GeneChrStartEndStrand
g234623Scaffold_55440:HRSCAF_438526911275922463-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247224.10.0e+00homeobox-DDT domain protein RLT3-like
SwissprotF4JRF5.14.9e-223Protein RINGLET 3
trEMBLA0A5P1E8U70.0e+00Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G12750.145.020.0 786Homeodomain-like transcriptional regulator

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag234623.t1
Allium fistulosumAfisC2G00828
Allium sativumAsa5G00900.1
Arabidopsis thalianaAT4G12750.1
Oryza sativaLOC_Os07g42750.1; LOC_Os07g42750.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain136639.14.3e-10
PF15612.3WHIM1Family72176221.89.1e-05
PF15613.3WSDFamily82890140.03.9e-10

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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