result

Gene information

Detail information of g236920

Location

Gene	Chr	Start	End	Strand
g236920	Scaffold_55746:HRSCAF_438832	767827	769179	-

Sequences

CDS

>g236920.t1
ATGAGCAATATAGTCATCAGAGAATACGTGGCAAGCACGGACCGGGAACGGGCCGTGGAACTCGAACGGGCATGCGAGGTTGGCCCCAGTGGTGAGGTGTCGATTTTTACCGACTTGCTCGGCGATCCTACGTGTCGTATTCGACATTCCCCTCTCTCTTTAATGCTGGTGGCGGAGACGTGTGGGCCAGAGAAGCAGATAGTGGGCCTGATAAGAGGATCCATCAAGACAGTTACGTGCGGTGCTAAAAACCTTAACCGCACCCCGAAGCACCAGACACCGATATGCACCAAGCTTGCCTACATCCTCGGCTTACGTGTCACTCCATCTCACCGTCGAATGGGCGTGGCGTATAAGCTGGTTACCAAACTGGAAGAATGGTTCGGATCCAACGGTGCAGAGTACTCCTACATCGCAACGGAGAAAGACAACACACCGTCGCTGAACCTCTTCACCGTTAGATGCGGCTACCAGAAATTCCGTACGCCGTCCATTCTTGTACAGCCCGTTCACGCTCACCGTATCTCAAAACCCCGTTACGTGTCAGTTGTAAAATTATCTACTCAAGAAGCGGAAAAACTTTACCGTCAAAAGCTTGCCACAACGGAATTTTTTCCGGATGACATAGACACCGTGCTGAATAACGGGCTGTCGTTGGGTACATACATTGCGGTGGACGAGCCGGGTTACGAATGGGCTGGGCTTGAACACTTTATGCAAGGTCCGCTGGAGTCGTGGGCGGTTGTGAGTGTGTGGGACTCGAGTGCAATGTTTAGAATGGAAGTGAAGGGAGTGTCGAAGGTGAAGAGGGCACTAGCGAAGGCAAGCCGGGCTTTGGACCGGGCGTTTAAGTGGATGAAGATACCGTCGGTGCCGGACCTTTTTGGGCCGTTCGGGTTTTACTTTTTGTATGGGCTAGGTGGGGAGGGTGACAAGGCGATGGAGCTGGTCAGGGCTTTGTGCGGGCACGCGCATAACATGGCAAGGGATGGAGGGTGTGGATTGGTGGTGGCTGAGGTGGCGGAATGCGAGCCGTTGAGGGAAGGGGTGATGAGGTGGAAGAGGCTGTCGTGTGATGGGGATATGTGGTGCGTGAAGAGGTTGGTGGATGAATACAGTGATGGGGAGGTGGGCGATTGGACTAAGGCCCAACCGGGGCTCAGTATTTTTGTGGACCCTAGAGAATTTTAG

Protein

Gene

>g236920.t1
ATGAGCAATATAGTCATCAGAGAATACGTGGCAAGCACGGACCGGGAACGGGCCGTGGAACTCGAACGGGCATGCGAGGTTGGCCCCAGTGGTGAGGTGTCGATTTTTACCGACTTGCTCGGCGATCCTACGTGTCGTATTCGACATTCCCCTCTCTCTTTAATGCTGGTTCGTATTCCATTTCTAACCTTCTTTTTTTCCCGAAATTATAAATACGTTTTTTTTAATATTTTTGTTACTGTTGAATAGGTGGCGGAGACGTGTGGGCCAGAGAAGCAGATAGTGGGCCTGATAAGAGGATCCATCAAGACAGTTACGTGCGGTGCTAAAAACCTTAACCGCACCCCGAAGCACCAGACACCGATATGCACCAAGCTTGCCTACATCCTCGGCTTACGTGTCACTCCATCTCACCGGTAACTGCCGTTATCCTCACCCCCTGATTTATCAACCTTTTACCTAACTGTAACCTAATTCTAGTTATTTTTAAACAACAGTCGAATGGGCGTGGCGTATAAGCTGGTTACCAAACTGGAAGAATGGTTCGGATCCAACGGTGCAGAGTACTCCTACATCGCAACGGAGAAAGACAACACACCGTCGCTGAACCTCTTCACCGTTAGATGCGGCTACCAGAAATTCCGTACGCCGTCCATTCTTGTACAGCCCGTTCACGCTCACCGTATCTCAAAACCCCGTTACGTGTCAGTTGTAAAATTATCTACTCAAGAAGCGGAAAAACTTTACCGTCAAAAGCTTGCCACAACGGAATTTTTTCCGGATGACATAGACACCGTGCTGAATAACGGGCTGTCGTTGGGTACATACATTGCGGTGGACGAGCCGGGTTACGAATGGGCTGGGCTTGAACACTTTATGCAAGGTCCGCTGGAGTCGTGGGCGGTTGTGAGTGTGTGGGACTCGAGTGCAATGTTTAGAATGGAAGTGAAGGGAGTGTCGAAGGTGAAGAGGGCACTAGCGAAGGCAAGCCGGGCTTTGGACCGGGCGTTTAAGTGGATGAAGATACCGTCGGTGCCGGACCTTTTTGGGCCGTTCGGGTTTTACTTTTTGTATGGGCTAGGTGGGGAGGGTGACAAGGCGATGGAGCTGGTCAGGGCTTTGTGCGGGCACGCGCATAACATGGCAAGGGATGGAGGGTGTGGATTGGTGGTGGCTGAGGTGGCGGAATGCGAGCCGTTGAGGGAAGGGGTGATGAGGTGGAAGAGGCTGTCGTGTGATGGGGATATGTGGTGCGTGAAGAGGTTGGTGGATGAATACAGTGATGGGGAGGTGGGCGATTGGACTAAGGCCCAACCGGGGCTCAGTATTTTTGTGGACCCTAGAGAATTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008792559.1	1.1e-147	probable N-acetyltransferase HLS1
Swissprot	Q42381.1	5.5e-139	Protein UNUSUAL SUGAR RESPONSE 2
trEMBL	A0A8K0IDI6	4.8e-148	N-alpha-acetyltransferase 20

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G37580.1	57.86	4e-137	484	COP3;HLS1;UNS2	Acyl-CoA N-acyltransferases (NAT) superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g236920	AT4G37580.1	401	160	3	5	396	3	403	57.86	4e-137	484
g236920	AT2G23060.1	410	158	6	4	396	5	413	57.07	9e-136	480
g236920	AT2G23060.2	359	136	6	55	396	1	358	57.10	5e-117	417

Ortholog group

Species	Genes
Allium cepa	g236920.t1
Allium fistulosum	AfisC5G06609
Allium sativum	Asa4G04907.1
Arabidopsis thaliana	AT2G23060.1; AT2G23060.2; AT4G37580.1
Oryza sativa	LOC_Os07g02540.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00583.22	Acetyltransf_1	Family	66	158	49.6	3.3e-13

Gene Ontology

Accession	Ontology	Name
GO:0000902	P	cell morphogenesis
GO:0008152	P	metabolic process
GO:0016049	P	cell growth
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0007165	P	signal transduction
GO:0006464	P	cellular protein modification process
GO:0006473	P	protein acetylation
GO:0006807	P	nitrogen compound metabolic process
GO:0040007	P	growth
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0008080	F	N-acetyltransferase activity
GO:0008150	P	biological_process
GO:0009314	P	response to radiation
GO:0009416	P	response to light stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009639	P	response to red or far red light
GO:0009640	P	photomorphogenesis
GO:0009719	P	response to endogenous stimulus
GO:0009723	P	response to ethylene
GO:0009725	P	response to hormone
GO:0009733	P	response to auxin
GO:0009734	P	auxin-activated signaling pathway
GO:0009755	P	hormone-mediated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009826	P	unidimensional cell growth
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0016043	P	cellular component organization
GO:0016407	F	acetyltransferase activity
GO:0016410	F	N-acyltransferase activity
GO:0016740	F	transferase activity
GO:0016746	F	transferase activity, transferring acyl groups
GO:0016747	F	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032870	P	cellular response to hormone stimulus
GO:0032989	P	cellular component morphogenesis
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0043543	P	protein acylation
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0048589	P	developmental growth
GO:0048856	P	anatomical structure development
GO:0048869	P	cellular developmental process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0060560	P	developmental growth involved in morphogenesis
GO:0065007	P	biological regulation
GO:0071310	P	cellular response to organic substance
GO:0071365	P	cellular response to auxin stimulus
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:1901564	P	organonitrogen compound metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network