result

Gene information

Detail information of g237523


Location
GeneChrStartEndStrand
g237523CHR55891371558923109+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020098683.17.4e-169SWR1-complex protein 4
SwissprotQ8VZL6.14.0e-135SWR1-complex protein 4
trEMBLA0A8K0I9Z42.5e-171SWR1-complex protein 4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G47210.161.012e-144 509myb-like transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag237523.t1
Allium fistulosumAfisC5G04033; AfisC5G04040; AfisC5G05097
Allium sativumAsa6G05141.1
Arabidopsis thalianaAT2G47210.1
Oryza sativaLOC_Os05g46330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16282.2SANT_DAMP1_likeDomain106180108.61.2e-31
PF05499.9DMAP1Family30737130.82.2e-07

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0000123Chistone acetyltransferase complex
GO:0005515Fprotein binding
GO:0000228Cnuclear chromosome
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000785Cchromatin
GO:0000790Cnuclear chromatin
GO:0000812CSwr1 complex
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001085FRNA polymerase II transcription factor binding
GO:0001103FRNA polymerase II repressing transcription factor binding
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003712Ftranscription cofactor activity
GO:0003714Ftranscription corepressor activity
GO:0005829Ccytosol
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0005654Cnucleoplasm
GO:0005694Cchromosome
GO:0043231Cintracellular membrane-bounded organelle
GO:0006139Pnucleobase-containing compound metabolic process
GO:0006259PDNA metabolic process
GO:0006304PDNA modification
GO:0006305PDNA alkylation
GO:0006306PDNA methylation
GO:0016570Phistone modification
GO:0006325Pchromatin organization
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006464Pcellular protein modification process
GO:0006473Pprotein acetylation
GO:0006475Pinternal protein amino acid acetylation
GO:0006725Pcellular aromatic compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006996Porganelle organization
GO:0008134Ftranscription factor binding
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009987Pcellular process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0016043Pcellular component organization
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0016569Pcovalent chromatin modification
GO:0016573Phistone acetylation
GO:0018193Ppeptidyl-amino acid modification
GO:0018205Ppeptidyl-lysine modification
GO:0018393Pinternal peptidyl-lysine acetylation
GO:0018394Ppeptidyl-lysine acetylation
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019538Pprotein metabolic process
GO:0031248Cprotein acetyltransferase complex
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031974Cmembrane-enclosed lumen
GO:0031981Cnuclear lumen
GO:0032259Pmethylation
GO:0032386Pregulation of intracellular transport
GO:0032388Ppositive regulation of intracellular transport
GO:0032879Pregulation of localization
GO:0032880Pregulation of protein localization
GO:0032991Cmacromolecular complex
GO:0033157Pregulation of intracellular protein transport
GO:0034641Pcellular nitrogen compound metabolic process
GO:0035267CNuA4 histone acetyltransferase complex
GO:0036211Pprotein modification process
GO:0042306Pregulation of protein import into nucleus
GO:0042307Ppositive regulation of protein import into nucleus
GO:0043170Pmacromolecule metabolic process
GO:0043189CH4/H2A histone acetyltransferase complex
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043228Cnon-membrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0043233Corganelle lumen
GO:0043412Pmacromolecule modification
GO:0043414Pmacromolecule methylation
GO:0043543Pprotein acylation
GO:0043967Phistone H4 acetylation
GO:0043968Phistone H2A acetylation
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044427Cchromosomal part
GO:0044428Cnuclear part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0044451Cnucleoplasm part
GO:0044454Cnuclear chromosome part
GO:0044464Ccell part
GO:0044728PDNA methylation or demethylation
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0046483Pheterocycle metabolic process
GO:0046822Pregulation of nucleocytoplasmic transport
GO:0046824Ppositive regulation of nucleocytoplasmic transport
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051049Pregulation of transport
GO:0051050Ppositive regulation of transport
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051222Ppositive regulation of protein transport
GO:0051223Pregulation of protein transport
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0060341Pregulation of cellular localization
GO:0065007Pbiological regulation
GO:0070013Cintracellular organelle lumen
GO:0070201Pregulation of establishment of protein localization
GO:0070491Frepressing transcription factor binding
GO:0070603CSWI/SNF superfamily-type complex
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0080090Pregulation of primary metabolic process
GO:0090087Pregulation of peptide transport
GO:0090304Pnucleic acid metabolic process
GO:0090316Ppositive regulation of intracellular protein transport
GO:0097346CINO80-type complex
GO:1900180Pregulation of protein localization to nucleus
GO:1900182Ppositive regulation of protein localization to nucleus
GO:1901360Porganic cyclic compound metabolic process
GO:1901564Porganonitrogen compound metabolic process
GO:1902493Cacetyltransferase complex
GO:1902494Ccatalytic complex
GO:1902562CH4 histone acetyltransferase complex
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:1903827Pregulation of cellular protein localization
GO:1903829Ppositive regulation of cellular protein localization
GO:1904589Pregulation of protein import
GO:1904591Ppositive regulation of protein import
GO:1904949CATPase complex
GO:1904951Ppositive regulation of establishment of protein localization
GO:1990234Ctransferase complex
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11324DMAP1, SWC4, EAF2; DNA methyltransferase 1-associated protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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