Detail information of g237823


Location
GeneChrStartEndStrand
g237823Scaffold_55846:HRSCAF_438932383964391460+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246175.17.7e-111two-component response regulator-like APRR3
SwissprotQ6LA42.22.0e-55Pseudo-response regulator 5
trEMBLA0A5P1E4P95.5e-111Two-component response regulator-like PRR95

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46790.151.302e-52 203APRR9;PRR9;TL1pseudo-response regulator 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag237823.t1
Allium fistulosumAfisC6G01946
Allium sativumAsa8G04664.1
Arabidopsis thaliana
Oryza sativaLOC_Os11g05930.1; LOC_Os11g05930.2; LOC_Os11g05930.3; LOC_Os11g05930.4; LOC_Os11g05930.5

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00072.21Response_regDomain3714879.22.1e-22
PF06203.11CCTMotif55960163.31.4e-17

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12130PRR5; pseudo-response regulator 5EC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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