result

Gene information

Detail information of g250827


Location
GeneChrStartEndStrand
g250827Scaffold_57436:HRSCAF_440522256686270497-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008786669.12.6e-181serine/threonine-protein kinase/endoribonuclease IRE1a isoform X3
SwissprotQ9C5S2.14.4e-154Endoribonuclease
trEMBLA0A8B7BWA51.8e-181serine/threonine-protein kinase/endoribonuclease IRE1a isoform X3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G17520.141.845e-160 561ATIRE1-2;AtIRE1A;IRE1-2;IRE1AEndoribonuclease/protein kinase IRE1-like

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag250827.t1
Allium fistulosumAfisC1G01937
Allium sativumAsa7G02055.1
Arabidopsis thalianaAT2G17520.1; AT5G24360.1; AT5G24360.3
Oryza sativaLOC_Os07g28820.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain423711149.78.7e-44
PF06479.9Ribonuc_2-5AFamily717843150.12.9e-44

Gene Ontology
AccessionOntologyName
GO:0051082Funfolded protein binding
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0016021Cintegral component of membrane
GO:0019898Cextrinsic component of membrane
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0002376Pimmune system process
GO:0003674Fmolecular_function
GO:0006986Presponse to unfolded protein
GO:0016020Cmembrane
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0003824Fcatalytic activity
GO:0004518Fnuclease activity
GO:0004519Fendonuclease activity
GO:0004521Fendoribonuclease activity
GO:0004540Fribonuclease activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0007165Psignal transduction
GO:0005783Cendoplasmic reticulum
GO:0008104Pprotein localization
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0005789Cendoplasmic reticulum membrane
GO:0043231Cintracellular membrane-bounded organelle
GO:0005975Pcarbohydrate metabolic process
GO:0006020Pinositol metabolic process
GO:0006066Palcohol metabolic process
GO:0006139Pnucleobase-containing compound metabolic process
GO:0006396PRNA processing
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006725Pcellular aromatic compound metabolic process
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0006983PER overload response
GO:0006984PER-nucleus signaling pathway
GO:0007154Pcell communication
GO:0046983Fprotein dimerization activity
GO:0008150Pbiological_process
GO:0008380PRNA splicing
GO:0042802Fidentical protein binding
GO:0042493Presponse to drug
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009751Presponse to salicylic acid
GO:0009814Pdefense response, incompatible interaction
GO:0009816Pdefense response to bacterium, incompatible interaction
GO:0009893Ppositive regulation of metabolic process
GO:0009894Pregulation of catabolic process
GO:0009896Ppositive regulation of catabolic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010467Pgene expression
GO:0010506Pregulation of autophagy
GO:0010508Ppositive regulation of autophagy
GO:0022607Pcellular component assembly
GO:0012505Cendomembrane system
GO:0014070Presponse to organic cyclic compound
GO:0016043Pcellular component organization
GO:0016070PRNA metabolic process
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0016787Fhydrolase activity
GO:0016788Fhydrolase activity, acting on ester bonds
GO:0046677Presponse to antibiotic
GO:0019222Pregulation of metabolic process
GO:0019538Pprotein metabolic process
GO:0019751Ppolyol metabolic process
GO:0033554Pcellular response to stress
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0030176Cintegral component of endoplasmic reticulum membrane
GO:0030968Pendoplasmic reticulum unfolded protein response
GO:0031090Corganelle membrane
GO:0031224Cintrinsic component of membrane
GO:0031227Cintrinsic component of endoplasmic reticulum membrane
GO:0031312Cextrinsic component of organelle membrane
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031329Pregulation of cellular catabolic process
GO:0031331Ppositive regulation of cellular catabolic process
GO:0031505Pfungal-type cell wall organization
GO:0031984Corganelle subcompartment
GO:0033036Pmacromolecule localization
GO:0033365Pprotein localization to organelle
GO:0034067Pprotein localization to Golgi apparatus
GO:0034263Pautophagy in response to ER overload
GO:0034613Pcellular protein localization
GO:0034620Pcellular response to unfolded protein
GO:0034641Pcellular nitrogen compound metabolic process
GO:0034976Presponse to endoplasmic reticulum stress
GO:0035966Presponse to topologically incorrect protein
GO:0035967Pcellular response to topologically incorrect protein
GO:0036211Pprotein modification process
GO:0036290Pprotein trans-autophosphorylation
GO:0042175Cnuclear outer membrane-endoplasmic reticulum membrane network
GO:0042221Presponse to chemical
GO:0042406Cextrinsic component of endoplasmic reticulum membrane
GO:0042803Fprotein homodimerization activity
GO:0051260Pprotein homooligomerization
GO:0043170Pmacromolecule metabolic process
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0043933Pmacromolecular complex subunit organization
GO:0044085Pcellular component biogenesis
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044262Pcellular carbohydrate metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044281Psmall molecule metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044425Cmembrane part
GO:0044432Cendoplasmic reticulum part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0045229Pexternal encapsulating structure organization
GO:0046483Pheterocycle metabolic process
GO:0046777Pprotein autophosphorylation
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051179Plocalization
GO:0051259Pprotein oligomerization
GO:0051641Pcellular localization
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0065003Pmacromolecular complex assembly
GO:0065007Pbiological regulation
GO:0070727Pcellular macromolecule localization
GO:0071216Pcellular response to biotic stimulus
GO:0071310Pcellular response to organic substance
GO:0071554Pcell wall organization or biogenesis
GO:0071555Pcell wall organization
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0071852Pfungal-type cell wall organization or biogenesis
GO:0090304Pnucleic acid metabolic process
GO:0090305Pnucleic acid phosphodiester bond hydrolysis
GO:0090501PRNA phosphodiester bond hydrolysis
GO:0090502PRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0098542Pdefense response to other organism
GO:0098827Cendoplasmic reticulum subcompartment
GO:1901360Porganic cyclic compound metabolic process
GO:1901564Porganonitrogen compound metabolic process
GO:1901615Porganic hydroxy compound metabolic process
GO:1901700Presponse to oxygen-containing compound
GO:0140096
GO:0140098

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08852ERN1; serine/threonine-protein kinase/endoribonuclease IRE1EC:2.7.11.1 3.1.26.- Protein processing in endoplasmic reticulumko04141
Autophagy - animalko04140
Apoptosisko04210

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.