result

Gene information

Detail information of g25663

Location

Gene	Chr	Start	End	Strand
g25663	Scaffold_15976:HRSCAF_167429	145554	150261	+

Sequences

CDS

Protein

Gene

>g25663.t1
ATGCTGAGACCACCAGCAGAAGTAGCGATGATAAGGATAACAATTCCGGATCGGATTATCGGTCATCGAAAAACAGCGGATGTGAACGGTATTGACAGGATTTGGTCCATAAGAAGATAACCGATCGATAAATTATCCGGGATAGTCACTGGTTTTTGTCTTAAGTTTATTATCGAAAGTTCAAAGATACCCTTATTAATTGGATAATTATTTTTAATAGGTAAAGAAGTTGTATGTGGATTGGGAGTGGAAGTAGAGATATATTTTTGTTTATTACTTTTATTAAGTTAGTTAGTTTGTATTAATATGCAGTTCTTAAAAGAATGACTTTTTTCCTTTTAAACTGGGCTCGGAGGACACCCCAAAAGTAGGTAGATAACGGAATTCAAATTTCATAACCATATTTTGCTTTAATGGAATTTTGTAAAGCACTTTTTTATAATCAATGTGGTTGAAAATATTTGTTAAATAATCAGGAAATTAAAGATTCGGTCAAATTGGGAACCTAATTGGGTTTTCCATGGGGTCGTTAATTTGTAAGTGTTAATGATGAAATAATCTTCCAGAATCTATTCTTCTTGATCTTATTCAGTGTTAACGGATATGATAATTATCCGATATCCGTCCGTATCCGCGGATGCGGATATTGCATCCGAAAGCATCCCATTGACAGGCCTAGTCTTACCGCTATGCTAAATGGTCTTTGACTTTGTTCGTGAAGAAATGTTTATTCTTGTATGAGAGTAGTGTTTGATCGTTCTTACAAATTCTATGTGACTTGACATCTCTTTGCTTGATTGTATAAATCAGCAATGCTTTCTCCATCTTATCACACACAGTGTATTTGTGGTGTGTCTATGCATGTATTTGTACGCATGAGCACATATACATTCATATGTCACTTACAAACAAACATAGATAGTTGTGTAAACCGCGCCCCCCCCCCCCCCCCCCCTCCCCCCCGGTTTGTCATACACATACATAAAGAAACTTAGATTACATCTCATATTTCTCATTTGCTGCATATAATCTTGTTTTTCATATTGGACATCACCAAGTTTGAAAGTTTTGGTAAACTTAAATATTGATCACAATTCCTATCACTAACTAAAATTGTGCTATGATTCACCAGAATTCCACTGATTTGACTCTTGTGGTCATCCTTGCTCAAATCATTGACATGTTTCTTCACTGTTCATAACAGAACGGCAACCGTCAGAGCCATCACTTGATTGGCAAACTCGAAGGCGGATCGCATTAGGATCTGCCAGAGGATTATCGTATCTACATGATCACTGCGATCCTAAAATTATTCATCGTGATGTTAAAGCTGCTAATATTTTATTAGATGAAGAATTTGAAGCCGTGGTTGGTGACTTTGGCTTAGCTAAACTAATGGATTATAAAGACACACATGTTACTACCGCTGTTCGAGGTACGATTGGTCACATTGCTCCAGAGTATTTATCAACAGGGAAATCTTCAGAAAAGACGGATGTGTTTGGATATGGGATTATGCTTTTGGAGCTCATTACTGGACAAAGGGCTTTTGATCTTGCTCGGCTTGCAAATGATGACGATGTCATGTTGTTGGATTGGGTAATGATGTTTACTAAATATTTTTTCCTTCAAGCTTTTAATGCGAAATACTTAAATTTTAAATGTTTGTATTCCATGGTTAATTGCACTGCACATACTCCTCTAGTACTCTGAATTTACATGAAACTGCGCCCTTAACCCTTGAAGCCAATTTACCAGGACATATTTACATTCGGATATTTGAATGATCTACCATTTATTTGTTTGTAGTGTCTTATCAAGAGCTTTGAGGAATTTGTGTGCTGCATATGGGCTTTGAGTGCAATTAAATTTGACCTTGAAGGATAGTTGTTTATAAAAGCCAATTAAAGATGCTATTAAAATACGCCCAACCAGTTAATTTTCTTAGCTAGACGTTAGATCAGGATTTGGTTTGCATGCAGTTCTACAACATTAAGTTACAAACAAGCATGAGCTCACACGTCGTCAATGTTGATTTAATCATCATCCTTGATAAAGCTGCTATAAGCATGAATTCTGTGTATGTGCCGTCATCATATTTAACATCCAAACATGTCAAATTTTAAAATATAAATTCTGAAATTTGGATGTGCATCAATATTCAATGTGCAAGCTGACATAATTGTTCTAAAAGTCACATAATATACATGTAGATAAATTTTCTCTTCAAGTAGTTAGTAGTAAATGGAATTATCGTTTTCCTGGCGTTGACTGGATCAACTTGCTATAAACACCCATTTCTAAGAAAATGTAAAGTCATTCATTGAGTTATAAGAAAAAAATTTATAACAAAATTTAGTGGTTGGTTTGTTTTAACGATGAAGTAGAAACACATGTTAATAGATTGTCCACTTAATCTTTTATGTTAAATCTTGCAACTGTCTTCAGGTAAAAGGCCTTCTAAAGGAGAAACGACTAGAAATGTTAGTTGATCCTGACCTTAAAAACAACTATATTGAACCAGAGGTAGAGTCACTTATCCAGGTAGCACTCCTATGCACACAAGGGTCGCCGACTGATAGACCCAAAATGTCAGAAGTGGTTAGAATGCTTGAAGGTGATGGCCTGGCTGAGAGATGGGAAGAATGGCAAAAGATTGAAGTTGTTCGGCTAGAAGTAGAGTTGCTTCCACATCGAAACTCAGAATGGATTCTTGATTCTACAGATAATCTTCATGCTGTCGAATTATCAGGCCCAAGGTTAGATTTTAATAAATTTCAGTTAGGTTGAGGCTTGCTATTCAGTAATATAACCAGTGTTTAGAAAACCGGACCGAACCGCCGGTTCAACCTTAAAAACCGTGAACCGCAAGACAGTCCGGTTTAAAAACTAATCAAACCGTTTTCTACATTAAACCGTACAAAACCGTGGTCAAACCTTACAAAACCGGATTTTATTACAAATTAAACCGGACAAAAATAAAATATTTCATTTGCACTGAATCAGGCTTTGGTTGGAAGCCCAAAAATCAGCACTGAATTAGCTCCAAAAGTCAACTATGCAACATCTGGAGCACGCATCATATATTTATAAAGGCAAATTGTGAAAGCCATTTCAGTGCTCTAGGATGTGGGACATTTGTTCCTTACAGAACTATATTATTTTTCAAAATTTAAACACATTACTGCTAATGCACTAAATCTAATTTGATTTTGTGTGTGCACGGTTTTTACGGTTCGACCGGTCGGACCTTTAAAACCTTCGACCTTAAGCTATCACGGTCTGACTTGCGGCACGGTTCTCAAAACATTGAATATAACTGATAATCAACCACTAGTTGTTTGTAACATGGCTTTGTATTTCAACCTGGGTTACAGTTTCGAAATGAAAATATCGACATATTAACATAACAATTTATGATCCCCACAAAGGAAGGTTTCCATATTACTGGACAGATGTCGCATTAAAACCAAGAGAATCATTATACGTCATATTTCATTAGACCACATCCAACGATTGGTTGGTTGGTTGATAAATTACTATGCTAAGACCATTGACAACACTGTGGCTAGTTCATCACATTTATCACAGAAAAACTTGCCAGCCGACACACTACACTCTAACCACCAAAACCATGCAATGCAACTTAAGAAAATTCCAGTGCCTTACAAATGCACGTAATTAAAATGGTAAATTATTTGCCAGTTTAATTGTGATAATTAAAGCAACAAAATGTTTGTTTTAATTTTCTGCCATTGGATCCAAATGCAAAACCTAATCGCCATTGTTCACAAAAATAAATAAATAAAATAGAAAATCCAAACTTTCTACAGAAATCGGAAAATCGTATCAAAATTTTTATGATTTTTTCTTTTAATTTTAAAAATTAAGTTTCTATTTACAAGATTTGATAAGTTTATTCAAGAATTTTGCGAAGAAATTCACACAGAAAGGATAGTGGTGGTGATGGTTATCGTGGCTTAGGTAATGGCGATGACGGTGAAGATGGTACTGTAGTGTAGCCATTGATGTCAGTGGTCGTAGTGATGAGGACGGTCATAAAGGCAACGGTAGGTGGTCGATGGAAATCGTTTGATAGAAAGCTGTGTTAGTTAGTTGAGTTTATAGACCTGCGTTTAAGTTCTATTTAGGCGTGTGTTCGCGCGCTTTTGAACAACGAAACTCACCTTTGTGTTGATATTGACTAGGTTACAAGTAATTTTTTTCAATAATTAAAATTATAAACCATATGATATTTATATGAACATCACTGAAAGTATTTTCATTAGAAGTCTTTAAATGGTTGCACCCATTGATCTTTATTTGGAGTTTCCTCATTTTATCAAAAAGGAGCAAAATTTTGAATTATTTTCAACTTAAAGAAAGTTTGATTTTATTTTTTTATTTGCGAATGTTTTGGGGTGATCGGCTGTCTTGATGTTCCAATCCAAAGACCTTTGGAAACACATTCTAAAAAGTAAAAACCTTACCATTTGAAATAATGGTCCTTAATTCAAATTTAGTTTCCATATCTGTTGTTTTTTCTTTTTCCTAAGCAACAAAGCATTAATCAAATAGAGATAGATGGTATTTGAGTTTTAAAATCAGCTCTTAAGTGCAATATATCAAAGTTTTAGCGGTGGGAGCAGAGTTTGCTTTGTTTCATTAAACTTCTCACTTGTTTTCATTCTTGCTATTTTACAGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3324292.1	4.8e-126	somatic embryogenesis receptor-like kinase
Swissprot	B8BB68.1	6.5e-128	Somatic embryogenesis receptor kinase 1
trEMBL	A0A833QKX9	3.4e-126	Somatic embryogenesis receptor-like kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G71830.1	88.14	7e-122	433	ATSERK1;SERK1	somatic embryogenesis receptor-like kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g25663	AT1G71830.1	236	28	0	30	265	390	625	88.14	7e-122	433
g25663	AT1G34210.1	236	30	0	30	265	393	628	87.29	1e-119	426
g25663	AT4G33430.1	239	43	2	30	265	377	615	80.75	9e-107	382

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	37	214	94.0	8.4e-27

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005488	F	binding
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0046983	F	protein dimerization activity
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0009593	P	detection of chemical stimulus
GO:0009719	P	response to endogenous stimulus
GO:0009720	P	detection of hormone stimulus
GO:0009725	P	response to hormone
GO:0009726	P	detection of endogenous stimulus
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009741	P	response to brassinosteroid
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009755	P	hormone-mediated signaling pathway
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0014070	P	response to organic cyclic compound
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0032870	P	cellular response to hormone stimulus
GO:0033993	P	response to lipid
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0042221	P	response to chemical
GO:0042803	F	protein homodimerization activity
GO:0043170	P	macromolecule metabolic process
GO:0043401	P	steroid hormone mediated signaling pathway
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0048545	P	response to steroid hormone
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051606	P	detection of stimulus
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0065007	P	biological regulation
GO:0071310	P	cellular response to organic substance
GO:0071367	P	cellular response to brassinosteroid stimulus
GO:0071383	P	cellular response to steroid hormone stimulus
GO:0071396	P	cellular response to lipid
GO:0071407	P	cellular response to organic cyclic compound
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:1901700	P	response to oxygen-containing compound
GO:1901701	P	cellular response to oxygen-containing compound
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13418	SERK1; somatic embryogenesis receptor kinase 1	EC:2.7.10.1 2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network