Detail information of g257545
| Gene | Chr | Start | End | Strand |
|---|
| g257545 | Scaffold_58371:HRSCAF_441457 | 1118610 | 1124878 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020259895.1 | 1.3e-114 | LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 54-like |
| Swissprot | Q6ZK57.2 | 5.3e-76 | Zinc finger CCCH domain-containing protein 54 |
| trEMBL | A0A8B7CJQ2 | 1.2e-112 | zinc finger CCCH domain-containing protein 18-like isoform X2 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G05160.1 | 38.08 | 1e-83 | 307 | | CCCH-type zinc fingerfamily protein with RNA-binding domain |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g257545 | AT2G05160.1 | 541 | 263 | 18 | 55 | 538 | 1 | 526 | 38.08 | 1e-83 | 307 |
| g257545 | AT3G52980.1 | 383 | 161 | 8 | 55 | 388 | 1 | 362 | 39.69 | 3e-71 | 266 |
| g257545 | AT3G51950.2 | 388 | 179 | 14 | 55 | 410 | 1 | 337 | 32.47 | 2e-38 | 157 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00642.21 | zf-CCCH | Family | 187 | 209 | 21.9 | 0.00011 |
| PF12872.4 | OST-HTH | Domain | 234 | 312 | 53.1 | 1.9e-14 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |