result

Gene information

Detail information of g263506

Location

Gene	Chr	Start	End	Strand
g263506	Scaffold_59184:HRSCAF_442270	85685	87304	-

Sequences

CDS

>g263506.t1
ATGGCTACTGATATTGCTCTTCATCATATCCATATTAGTAAGCATGATGGGCTATCCAATGATGAAGAAGCCAAGCTCAAGCTAGACTGCAAAGGCAGTGAAGGAGGCAGAGGCACTTACTTGGACGGAATCGTCGTCGATGGAGCTCCCATGTGCGAGTGCAACACTTGCTACACCGGTCCCCATTGCTCCACTTTGCTCCCTAACTGCTCCTCTGATGTTGTAAGCGGCGACGCTTTGTTTCTCGAAAAATATTGGATGCAACACAAATCCAACGCCGCTCTTCTCATATCACCCTGTCATAGAATGAGCTATTTCTTCCAGCCATCTTCCGGTAATATCATCAACGCCGAGCTTGAAAAACACGTCAGACTTTTACATCAGGCCGTCGGTAATGCCAAAGCCGATGATAAGTACATCGTCTTCGATACCGGCGTCACTCAACTCCTCAACGGTCTAGTCATCGCCCTTTCCCCAAACGATATATCACTCGATGTGCAACCATCAAAAGTTGTCGCAGCTGCCGTCCCTTACTATCCCGTCTTCAGAAAGCAAACCAAATTCTTTCGTTTTACCGGCTACGAATGGAAAGGGAACGCATCCGATTACGTTAACGCCGCTTCTCCTCAAAACATCATAGAATTGGTGACTTCGCCCAATAATCCCGAAGGTCGATTTCACCATTCCATAATCAATGGCTCTTTAGCAATCCACGACCACGTCTACTATTGGCCGCATTATACCCCAATTGCACAACCCGCCAACGAAGATATCATGTTGTTTTCCATGTCCAAATACACTGGACATTCCGGCAGCAGATTCGGTATACGACAGGGTAATGGAGTACATGACCGAGAACACGGAAGGAACTTCCCACGATACGCAACTTCGAACCTTGAAACTAATAAAGGAGATCTTGTTGCAAATGAAAACGAAACGGGAAACAATGGGCCGACATCAACCAATTTGGCTATCAAACATTCATTCGGATGGCTAAAGTGTGAATGGGAGGAAGACACGGATTGTGAAGCTCTACTCAGGAATGCTCAAATTAAAACTCAAAGCGGAGTGCTTTTTGAAGCCGATAGTCGTTACACACGCTTGATTTTAATCAAGACGGAGGACGACTTCGATCAAATGATGGAGAAGTTGAAGCCACTTGTATCTGCAAAAAGGAGCATTTGA

Protein

Gene

>g263506.t1
ATGGCTACTGATATTGCTCTTCATCATATCCATATTAGTAAGCATGATGGGCTATCCAATGATGAAGAAGCCAAGCTCAAGCTAGACTGCAAAGGCAGTGAAGGAGGCAGAGGCAGTGGCCGCAATAGACTGCTCCGGGCATGGCAGAGCTTACTTGGACGGAATCGTCGTCGATGGAGCTCCCATGTGCGAGTGCAACACTTGCTACACCGGTCCCCATTGCTCCACTTTGCTCCCTAACTGCTCCTCTGATGTTGTAAGCGGCGACGCTTTGTTTCTCGAAAAATATTGGATGCAACACAAATCCAACGCCGCTCTTCTCATATCACCCTGTCATAGAATGAGCTATTTCTTCCAGCCATCTTCCGGTAATATCATCAACGCCGAGCTTGAAAAACACGTCAGACTTTTACATCAGGCCGTCGGTAATGCCAAAGCCGATGATAAGTACATCGTCTTCGATACCGGCGTCACTCAACTCCTCAACGGTCTAGTCATCGCCCTTTCCCCAAACGATATATCACTCGATGTGCAACCATCAAAAGTTGTCGCAGCTGCCGTCCCTTACTATCCCGTCTTCAGAAAGCAAACCAAATTCTTTCGTTTTACCGGCTACGAATGGAAAGGGAACGCATCCGATTACGTTAACGCCGCTTCTCCTCAAAACATCATAGAATTGGTGACTTCGCCCAATAATCCCGAAGGTCGATTTCACCATTCCATAATCAATGGCTCTTTAGCAATCCACGACCACGTCTACTATTGGCCGCATTATACCCCAATTGCACAACCCGCCAACGAAGATATCATGTTGTTTTCCATGTCCAAATACACTGGACATTCCGGCAGCAGATTCGGGTACGACAGTCTTTTTTTATTTTTTCTTCTTCTTAATTAGTAACGTTAACTTTCATTCATATGTATATTGTCAACGGTGGTGGTCTGCATCATTCATGTGTGCTAATCATAACAAATTACATATTGTATATATGTACAGGTGGGCGCTCATAAAGGACGTGAAAGTATACGACAGGGTAATGGAGTACATGACCGAGAACACGGAAGGAACTTCCCACGATACGCAACTTCGAACCTTGAAACTAATAAAGGAGATCTTGTTGCAAATGAAAACGAAACGGGAAACAATGGGCCGACATCAACCAATTTGGCTATCAAACATTGTCTAAAAGATGGGCTGAACTTACCAAGCTAGTTGCATCTTCAGATCGATTCTCCCTTCAAAACCTCTCTCCGCAATATTGCAACTACTTCAAAAAAGTTAGAGATCCCTCACCATGTATGCTCCTAGCTAGCTACTTAATTAATTTCTCTAACTTTGTCCGTTTATATATATCTTCAAACCAACTGCATATATGCATGCTTAACGCAATTGCTAATTTACATCAATTAATCGCAGCATTCGGATGGCTAAAGTGTGAATGGGAGGAAGACACGGATTGTGAAGCTCTACTCAGGAATGCTCAAATTAAAACTCAAAGCGGAGTGCTTTTTGAAGCCGATAGTCGTTACACACGCTTGATTTTAATCAAGACGGAGGACGACTTCGATCAAATGATGGAGAAGTTGAAGCCACTTGTATCTGCAAAAAGGAGCATTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	BAD06448.1	4.0e-121	alliinase-like
Swissprot	P31756.1	3.9e-105	Cysteine sulphoxide lyase
trEMBL	Q76BK3	2.9e-121	Alliinase-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	37.02	1e-70	263		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g263506	AT1G34060.1	416	207	13	21	388	41	449	37.02	1e-70	263
g263506	AT1G34040.1	413	200	11	28	389	48	448	36.32	1e-65	247
g263506	AT1G23320.1	377	190	13	71	391	22	384	31.03	1e-42	171

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	30	70	48.3	8.5e-13
PF04864.10	Alliinase_C	Domain	73	276	306.7	1.7e-91
PF04864.10	Alliinase_C	Domain	325	387	73.7	1.1e-20

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network