Detail information of g264493


Location
GeneChrStartEndStrand
g264493Scaffold_59305:HRSCAF_442391325492337670-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257515.12.1e-84vesicle-fusing ATPase-like
SwissprotQ9M0Y8.22.4e-77Vesicular-fusion protein NSF
trEMBLA0A5P1FD781.5e-84Vesicle-fusing ATPase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G04910.172.142e-84 310NSFAAA-type ATPase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain16319627.81.9e-06
PF00004.26AAADomain28039330.92.8e-07

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0016020Cmembrane
GO:0005773Cvacuole
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0005794CGolgi apparatus
GO:0005911Ccell-cell junction
GO:0009506Cplasmodesma
GO:0012505Cendomembrane system
GO:0030054Ccell junction
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0055044Csymplast
GO:0071944Ccell periphery

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06027NSF, SEC18; vesicle-fusing ATPaseEC:3.6.4.6 Autophagy - yeastko04138
Vasopressin-regulated water reabsorptionko04962
GABAergic synapseko04727
Synaptic vesicle cycleko04721

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.