result

Gene information

Detail information of g264628

Location

Gene	Chr	Start	End	Strand
g264628	Scaffold_59325:HRSCAF_442411	12915	15272	+

Sequences

CDS

>g264628.t1
ATGACCCAAATCCTCACTTACGAGCTCAGTTCGAGCAAATCCGTCAAGTTTCTCGACGGTAATCTTGGTTTTATGCTCTTTTTTAGTGTAATTGTTTTTCTCGGTTATTTAAATAATGCGGTCTCTGAAGAAATTTCAATGGTTTCTTTGCCTCTTGGTTCTATTGTTCATTGCCCTGAAAACAAGATATTGGTGTCTGAAAGTAGTGATTTTGCACTTGGTTTTTTGAATGATTATCAAAAGGATGCAGATGGATTTGTAGTTGGGGTTTATCATAATTTTATTCAGAATGGTATTGAAAAGATCGCAGTTTGGACTGTAGGCGGTGCTGGGGTTAGAGTTTCTGAAAACTCCTCATTTGAGCTTTCTTTGGATGGGAGTTTAGTATTGTTTTCTAACAATATACTAGTTTGGAGTAGTAATACTGCTAATTTAGGGGTAAAATATGCTACTTTGTTGGATAATGGTAATTTAGTTCTTGTTGGCTTTGGTGGTAAATATATTTGGCAAAGCTTCGATTACCCAACTGATACTTTGCTTCCTGACCAATCTTTTCATTACCCTCAAACATTACAAGCCTCTTCACCTAATTCGGTTGCTAGTTATTATAGTTTGAAAATGAAAAGTTTCGGGGAGATTTATCTAGTGTGGGATGATAATGTAACTTATTGGAGTAGCCCATTGAGCTTGAATTCAATTGTTGATGAAGTTAGGTTTGAGGCTGATGGACGACTTGGGTTATTTGATTTTAAAGGCAATGCTAGTTGGTTTGTATTAAGTGAAGATTTTAAAGATCCGTTTGTTCAATATAGAAGATTGAGAATTGATGAAGATGGAAATTTGAGAATTTATTCATGGAGAAATACTAGTTCATCTTGGAAAGTTGTATGGCAAGCTGTTCAATCTCAATGCAATGTGTTTGGTTCATGTGGACTGTATAGTGTATGTAGTTACGATTCAAATGGTCCTACTTGTGGTTGTTTGAACTCCAATTCAAAACCAAATGCATGTGAGAGGATGACAGATTTGGCTAACTGTGAGAGAGGAGTAAGCATGGTTGTGCTCAAACAAACTGTATTATACAGTCTTTATCCACCTCATGATATAGAAATCATGCTTAGCATGGAGGCATGCAAGCAGTATTGCTTGAATGATACCTCTTGTTATGCTGCGACTGCCAAAAATGATGGTTCGGGTATTTGCACTGTTAAAAAAACTAGCTTTATCAGTGGATTTAGCTATTCATCTACTCAGTCGATTTCATTCATGAAAGTTTGTTTAGTTCCAGAAGCAGTGTCGGCGCAAGCAGCAAATTTAGGTGCAAATGGTAGTCCACCATCATCGCAACAAGAAACCATAACAGAAATAGTTGGAAACAGTAAGAGCTATAAAGTTGCTATCGTGGGATTGCTTTTGATTACAGGTTCTGTTTTTCTTGTAGTAGAGATGGTTGTGTTTTGGCTTGTGATCTATAAACGAAGGCAAAGCAGGACTTTGAAGCTAAATAGAAACAAATTCGGGAAAGATATAGCGATGAATCCTCATTATAGTGCTTTGGTAAGGCTATCGATCGAAGAAGTCCAAGCATTAACTAAGAATTTTGGAAATAAGTTGGGACCAAGTATCTATAAAGGCATTCTTGCAAACAAAATTATGGTAATTGTCAAAGTCCTCAATGACGTTGTAGCCTCTGAGAGAGAATTCCAATTGGTTGTCTCAAATCTGGGAAGCACACACCATAAAAATCTTGTAGCTTTGAAAGGATTTTGTTATGACCCGAAACACAAACTCATATTATACGAGCATATAAATAATGGATCACTTGATACTTGGCTAGTTGATAAGAAAAGCAAATGCAAAGGGTGGCATCAAAGGATAAACATAGCTATCGGTGTAGCAAGAGCTCTTGCATACTTACACTTGCAATGCAAACAATGCATAGCTCATGGTAACTTAAAGCTCGAAAATGTTCTTTTGGATGAGGATTTGAATCCCAAATTGTCTGATTTTGGTTTACATGGTCTATTAAAGAAGAATGATGCAGCCTCTTCCTCCGAATCTCTACCAGAAAGAGATGTATACATGTTTGGTGTGCTTCTACTTCAAATCTTTCTTGGAAAAAAACAAGGGTTTGAGAAAGAGTGTTGTGATTTGGCATATCAACTGTGTGAAAGTGAAGATTTTGATGGAGTTGTTGACTTTAAGTTGGAAGGAAGGGTTGAGGTTGAAGGAATTCACAGAGTAGTGAAATTAGCTTTATGGTGTATGCAAGATAATACCGTGCATAGACCTTCGATCAGTGAAGTCGTTAGGATTTTGGAAGGTGCCCTATCTTTAGATATGCCTCCAAGAACTTAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242406.1	1.6e-302	G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1
Swissprot	P93756.1	2.4e-122	S-domain-3 (SD3) receptor kinase 1
trEMBL	A0A2I0VN57	1.0e-250	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G41890.1	37.37	1e-119	427		curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g264628	AT2G41890.1	760	418	21	44	783	20	741	37.37	1e-119	427
g264628	AT1G34300.1	800	444	28	46	785	23	770	30.50	1e-92	337
g264628	AT4G32300.1	776	465	26	63	785	47	776	27.32	2e-61	234

Ortholog group

Species	Genes
Allium cepa	g264628.t1
Allium fistulosum	AfisC5G04678
Allium sativum	Asa0G01374.1; Asa0G01526.1; Asa7G03677.1
Arabidopsis thaliana	AT2G41890.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	104	190	73.3	1.3e-20
PF00954.17	S_locus_glycop	Domain	269	329	46.7	3.5e-12
PF07714.14	Pkinase_Tyr	Domain	542	772	78.9	3.2e-22

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network