result

Gene information

Detail information of g266442

Location

Gene	Chr	Start	End	Strand
g266442	Scaffold_59533:HRSCAF_442619	519455	520995	+

Sequences

CDS

>g266442.t1
ATGTGCGTGTTGGAGATGGTTACTTTTGAGTATCCATATAGTGAATGCAAGAACCCTGCACAAATTTACAAGAAAGTCATATCTGGAGTAAAACCAGATGCACTATATAGAGTTAGGGATCCAGAAGTCAGAAAATTCATAGAAAAATGCCTGGCAACTGCATCTCAAAGACTGTCAGCTAAAGAGCTATTAATGGATCATTTTCTTCAAAGCCAGGATCCTGGATCGGGTTGTTGGGAAGCGGATGTTATTGACATGGGGCCCATTTTCATTCCACCTTCGTATAATAGTGAATCATCCAATGATACTGATGATGATAACGAAGACATCGAATCTACTGTCAAGTCTCATGGCATCGACCTCTTTGACAACAACGACGATGACGATGACGATGAAACATATATTGGAGATGTAGATATTTCGATAAAAGGAAAAAAAGATGAAGACGGAGGGATATTCATTCGACTTAAGATTGGTGATAAAGAAGGACATATGCGCAACGTATATTTTCCATTTGATATTGAAGAAGACACTGCACTTGAAGTGGCAGCAGAAATGGTCGACGAGTTAGACATAACTGATCACGAAGTCACTAGAATAGCAGAAATGATCGATGGAGAAGTTTCTCTGTTAGTTCCAAACTGGAAGAATCGCATGTATGTAGAATATGTACACAGCAACACCAATTCATCTCCATCAACTGAATCCAACTTTGAGTTCCCTAAACTGCATGAGCAATTCGAAGATGTCAGAGCACAATCTGAAGAAGTAAAAGTCCAAGAAGATAGCATCATAGAACCAAATGCCATGAAAAAATCAGAAGAACATGAGAAGAAGAGTCCACGAGACCCAAGGGAAATGAACATAATGTATCAGATGAGGGCAAAAGGTTCAAGAAAAGGCTCTTTGGCAAGTAGAAGTTGTAGGAATCCGAATCTGGCTTTGGATCTTGATGTTATAAAGAAATACGATGAGAAAAATGATAAAATACAGAACCCAACACCGATTCAGTCTTTCCATTTAAGCAGAAATTCTTCGTGTAAGCGACCTGATTCGGAGGTTGAGCAGAGCTTGAGCAGCAATTCTGCAGCCAAGGATGAAGAAATGAATCAGGATGTGTTGGAGAAAATATTTCCGAAGAATAGCTGTTATGTTGGTGAGTATTTACCAGCTTCTCTTCCGAGAGCCAGGTCACTCTGCATTTAG

Protein

Gene

>g266442.t1
ATGTGCGTGTTGGAGATGGTTACTTTTGAGTATCCATATAGTGAATGCAAGAACCCTGCACAAATTTACAAGAAAGTCATATCTGTAAGTTCCTTGGCTTATTCAACTCTGATAGTGGTATAAATCTCCTTGAACTATATAAGGAGCAATATGAATCTTTACCTGGTACCATTGGTATATTCAAGGCTTTATAACAATTTATATACACCTGCGAACAGTAATGAATCTTTTTCACATGTAAGATAAAATTATGTTATGAACAAACGTATAACTCCTAGAGTTTAAGAGCAAAAGCTAATGCTATGACTTAATGTTTTCAACTATATTTTAGGGAGTAAAACCAGATGCACTATATAGAGTTAGGGATCCAGAAGTCAGAAAATTCATAGAAAAATGCCTGGCAACTGCATCTCAAAGACTGTCAGCTAAAGAGCTATTAATGGATCATTTTCTTCAAAGCCAGGATCCTGGATCGGGTTGTTGGGAAGCGGATGTTATTGACATGGGGCCCATTTTCATTCCACCTTCGTATAATAGTGAATCATCCAATGATACTGATGATGATAACGAAGACATCGAATCTACTGTCAAGTCTCATGGCATCGACCTCTTTGACAACAACGACGATGACGATGACGATGAAACATATATTGGAGATGTAGATATTTCGATAAAAGGAAAAAAAGATGAAGACGGAGGGATATTCATTCGACTTAAGATTGGTGATAAAGAAGGTGAAAATATGTTTAATGTTTCACACTTATTCATATTTGTTTTTCCTGGTATATAGCCTATAAAATTAAGTTTTTCATGATTGTGCAGGACATATGCGCAACGTATATTTTCCATTTGATATTGAAGAAGACACTGCACTTGAAGTGGCAGCAGAAATGGTCGACGAGTTAGACATAACTGATCACGAAGTCACTAGAATAGCAGAAATGATCGATGGAGAAGTTTCTCTGTTAGTTCCAAACTGGAAGAATCGCATGTATGTAGAATATGTACACAGCAACACCAATTCATCTCCATCAACTGAATCCAACTTTGAGTTCCCTAAACTGCATGAGCAATTCGAAGATGTCAGAGCACAATCTGAAGAAGTAAAAGTCCAAGAAGATAGCATCATAGAACCAAATGCCATGAAAAAATCAGAAGAACATGAGAAGAAGAGTCCACGAGACCCAAGGGAAATGAACATAATGTATCAGATGAGGGCAAAAGGTTCAAGAAAAGGCTCTTTGGCAAGTAGAAGTTGTAGGAATCCGAATCTGGCTTTGGATCTTGATGTTATAAAGAAATACGATGAGAAAAATGATAAAATACAGAACCCAACACCGATTCAGTCTTTCCATTTAAGCAGAAATTCTTCGTGTAAGCGACCTGATTCGGAGGTTGAGCAGAGCTTGAGCAGCAATTCTGCAGCCAAGGATGAAGAAATGAATCAGGATGTGTTGGAGAAAATATTTCCGAAGAATAGCTGTTATGTTGGTGAGTATTTACCAGCTTCTCTTCCGAGAGCCAGGTCACTCTGCATTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241428.1	1.9e-97	probable serine/threonine-protein kinase WNK1 isoform X2
Swissprot	A2YMV6.2	1.7e-63	Protein kinase with no lysine 1
trEMBL	A0A5P1FAF8	7.4e-64	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04910.1	50.78	2e-64	243	ATWNK1;WNK1;ZIK4	with no lysine (K) kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g266442	AT3G04910.1	258	82	5	1	216	213	467	50.78	2e-64	243
g266442	AT3G04910.2	258	82	5	1	216	190	444	50.78	3e-64	242
g266442	AT3G04910.3	258	82	5	1	216	87	341	50.78	4e-64	242

Ortholog group

Species	Genes
Allium cepa	g266442.t1
Allium fistulosum	AfisC2G02288
Allium sativum	Asa5G02075.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
-	-	-	-	-	-	-

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0005829	C	cytosol
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08867	WNK, PRKWNK; WNK lysine deficient protein kinase	EC:2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network