result

Gene information

Detail information of g269330

Location

Gene	Chr	Start	End	Strand
g269330	Scaffold_59982:HRSCAF_443068	20651	22987	-

Sequences

CDS

Protein

Gene

>g269330.t1
ATGGAGGAAGCTATAACTTCCCTTCCATCCTTCCCCTTATATTGCTTTTGCAAGCTTCTTCCATTCTCATTATTTTTCATTTCATGTCTCTCTATCTACCACTTTAATCAAAGAAATCTAAGTGGGCCAAAGACATGGCCAGTCATGGGCGCAACAATTGAGTTGCTAAGAAATTACCATCGTATGCATGACTGGCTTGCAGATTACTTAGCAGAATATAAGACATTTAAAGTACCTCTTCCTTTCACAACTTATACATATACAGCAGATCCAGTCAACGTTGAACATATGCTCAAGGTCAACTTCTCCAATTACCCCAAGGTATGAGCAAATCATTGTACTTTTTACCTTTGTGTGACAGAACATGAATCATTTATCAAATTCTCACTTAATGATGTGATGAAGGGAGAGCTGTATCGGTCGTACATGGATGTATTACTCGGAGATGGCATTTTCAATGCAGATGGTGAGATATGGAAGAAGCAGAGAAAGACCGCTAGTTTTGAGTTTGCCTCGAAGAATTTGAGAGACTATAGTACCATTGTGTTTAGAGAGTATGGGACAAAACTGTCCAGTATTTTGTGTCAAGCTTCAATTGATAACAAAGACGTTGATATGCAGGTTATTTTTCTCTTTCCCTTCTTTAAAAAATATAAAACCAATGTGTACAACAGTTAAAATTAGTGTTTGGTCTTTAATTTTAGGATTTGTTCATGAGGATGACACTGGACTCTATATGCAAAGTTGGATTTGGTGTTGAGATTGGAACGTTATCAGCTGATGTGCCTGAAAATGCATTTGCAAATGCTTTTGACACTGCTAACAGCATAGTAACGCTAAGATTTGTTGATCCATTATGGAAATTAAAGAGGTTCTTTCATATAGGAACGGAAGCAGTTCTTGATAGATGTATAAAAGTGGTTGACGACTTCACATATGATGTTATTAGGAGAAGAAAAGAAGAGATGGTTGGAGCTAAAGGCGATGGATCACGAGATAAGGTAGTAATACTTTGCTCCATTAATTTACCTGCAGAACTCTTACAAATAATAATTCTAACAGAAGGGTTGATTTTTGTTCTTCCAAGTATTCTAAGTTTCTAAAGTAAAAATAATTGCAGGGTCAGGTAAAGCATGACATACTATCAAGATTCATAGAGCTAGGAGAAGATCCAGAAAGCAACTTCAGTGATGACAAAAGCCTAAGAGATGTGGTGCTTAACTTTGTAATCGCAGGTCGAGACACAACTGCCACGACACTATCATGGTTCACATACATGATTATGACTCACCCTCATGTGGCCGAAAAGATATACCTGGAACTCAAGGCATTTGAAGAAAAGCAGGCCAAAGATGAGAATATAGTGTTAATCTCTTGGCAAAGTAGTGATACTGAAACGTTTCAGAAAAGGATTTCTCAGTTCGCTTCACTGCTAAATTATGATTCTCTGGGAAGGCTAGTTTACCTTCATGCTTGCATCACTGAGACTCTCAGGCTCTATCCCGCAGTTCCTCAGGTGAAATTAATGATCTGCAGAATATTAGAGCACAAAATTACAAAATGGGATTAGAATTTTATCAATATTAATAAGGGGGTTTTTAGACACAGGAAAGAAGTTGTAAAAAAATTTAGTATCGGGGACAGCAAGTTTGTTTTTTAGTCTGAAGGACACTTTTTAGTGTAAATCACAGAATGATAGATGTAGCTATCATTTTCTGTTTACACTATAAAGTGTCGTTCAGATTAAAAAATAAACTTATTGTTCCTGGAACTAAATTTTTTTTTTTAACTTTTTCCTTGTGCCTATTTTCCTGTATTAATAAAATACGATAGTCAAAACTATAATAAGTTTGCTTTAATAATTGTGTATAGGACCCAAAAGGAGTTTTAGAAGATGATGTGCTACCAGATGGAACAAAAGTAAAAGCAGGAGGATTAATGACATATGTTCCATACTCAATGGGACGAATGGCTTATAACTGGGGAGAAGATGCAGCATCTTTCAAACCCGAGCGATGGATTGAGGATGGAATTATGCGCAATGTCTCTCCATTTAAATTCACAGCTTTTCAGGTATATATAATCATGCTATTTTGTTACAAAATCAAAGCTTCTTTGAGACTAAAATATATATAAATTCATTTGTTACCATTTCAGGCTGGACCAAGAATATGCCTGGGAAAGGAATCTGCGTATTTACAAATGAAGATGAGTCTCGCCATATTATGTAGATTTTTTACTTTCAAACTGGTTCCGAATCATCCGGTGCATTATAGAATGATGACTATATTATCCATGGCACATGGATTGAAGCTCACTGTCTCTCGAAGAATATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257276.1	8.1e-258	cytochrome P450 704B1
Swissprot	Q9C788.1	7.7e-213	Long-chain fatty acid omega-hydroxylase
trEMBL	A0A5P1FEX8	5.8e-258	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69500.1	69.14	0.0	757	CYP704B1	cytochrome P450, family 704, subfamily B, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g269330	AT1G69500.1	512	153	2	28	535	13	523	69.14	0.0	757
g269330	AT2G45510.1	515	264	8	23	530	14	503	42.52	4e-113	405
g269330	AT2G44890.1	515	274	8	19	530	12	497	40.58	4e-108	388

Ortholog group

Species	Genes
Allium cepa	g269330.t1
Allium fistulosum	AfisC3G06255
Allium sativum	Asa2G05295.1
Arabidopsis thaliana	AT1G69500.1
Oryza sativa	LOC_Os03g07250.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	41	524	216.1	7e-64

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006725	P	cellular aromatic compound metabolic process
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0008150	P	biological_process
GO:0009058	P	biosynthetic process
GO:0009555	P	pollen development
GO:0009987	P	cellular process
GO:0010208	P	pollen wall assembly
GO:0010584	P	pollen exine formation
GO:0022607	P	cellular component assembly
GO:0048646	P	anatomical structure formation involved in morphogenesis
GO:0010927	P	cellular component assembly involved in morphogenesis
GO:0016043	P	cellular component organization
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016713	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0019438	P	aromatic compound biosynthetic process
GO:0030198	P	extracellular matrix organization
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032989	P	cellular component morphogenesis
GO:0043062	P	extracellular structure organization
GO:0044085	P	cellular component biogenesis
GO:0044237	P	cellular metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0045229	P	external encapsulating structure organization
GO:0048229	P	gametophyte development
GO:0048856	P	anatomical structure development
GO:0048869	P	cellular developmental process
GO:0071840	P	cellular component organization or biogenesis
GO:0080110	P	sporopollenin biosynthetic process
GO:0085029	P	extracellular matrix assembly

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20495	CYP704B1; long-chain fatty acid omega-monooxygenase	EC:1.14.14.80	Fatty acid degradation	ko00071
K20495	CYP704B1; long-chain fatty acid omega-monooxygenase	EC:1.14.14.80	Cutin, suberine and wax biosynthesis	ko00073

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network