Detail information of g269513


Location
GeneChrStartEndStrand
g269513CHR4161633754161647716+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265527.19.7e-66zinc finger CCCH domain-containing protein 33-like isoform X1
SwissprotO48772.11.9e-18Zinc finger CCCH domain-containing protein ZFN2
trEMBLA0A5P1EW497.0e-66Zinc finger CCCH domain-containing protein 58-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G04990.144.891e-74 278Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag269513.t1
Allium fistulosumAfisC4G04776
Allium sativumAsa5G04069.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily22925131.69.7e-08
PF00642.21zf-CCCHFamily26929336.43e-09
PF00642.21zf-CCCHFamily31333833.23e-08
PF00642.21zf-CCCHFamily44346836.82.3e-09
PF00642.21zf-CCCHFamily48851328.31.1e-06

Gene Ontology
AccessionOntologyName
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003723FRNA binding
GO:0003729FmRNA binding
GO:0005488Fbinding
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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