Detail information of g272544


Location
GeneChrStartEndStrand
g272544CHR2354963373354973927+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010939643.18.1e-168cyclin-dependent kinase C-2 isoform X1
SwissprotQ6I5Y0.19.3e-161Cyclin-dependent kinase C-1
trEMBLA0A1D1YL781.2e-168Cyclin-dependent kinase C-2 (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G10270.172.451e-178 622CDKC;1cyclin-dependent kinase C;1

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Ortholog group
SpeciesGenes
Allium cepag272544.t1
Allium fistulosumAfisC2G01767
Allium sativumAsa1G02051.1; Asa3G00077.1; Asa4G04892.1
Arabidopsis thalianaAT5G10270.1; AT5G64960.1; AT5G64960.2
Oryza sativaLOC_Os01g72790.1; LOC_Os05g32360.1; LOC_Os08g35220.1; LOC_Os08g35220.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain6253204.71.5e-60

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0051726Pregulation of cell cycle
GO:0009615Presponse to virus
GO:0003824Fcatalytic activity
GO:0005829Ccytosol
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009987Pcellular process
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0036211Pprotein modification process
GO:0043170Pmacromolecule metabolic process
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051704Pmulti-organism process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0097472Fcyclin-dependent protein kinase activity
GO:0099402Pplant organ development
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08819CDK12_13; cyclin-dependent kinase 12/13EC:2.7.11.22 2.7.11.23 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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