result

Gene information

Detail information of g274373


Location
GeneChrStartEndStrand
g274373Scaffold_60694:HRSCAF_443780164228164803-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrTEY47146.11.3e-37EREBP-like factor
SwissprotA0A1X9PY88.16.5e-21Protein ERF REQUIRED FOR NODULATION 1
trEMBLA0A8X8YSZ37.2e-33Uncharacterized protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G19790.161.902e-22 102RAP2.11related to AP2 11

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag274373.t1
Allium fistulosumAfisC4G01835; AfisC4G01850
Allium sativumAsa4G01591.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain196849.72.9e-13

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000302Presponse to reactive oxygen species
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006979Presponse to oxidative stress
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0010038Presponse to metal ion
GO:0009719Presponse to endogenous stimulus
GO:0009723Presponse to ethylene
GO:0009725Presponse to hormone
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022622Proot system development
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0035864Presponse to potassium ion
GO:0035865Pcellular response to potassium ion
GO:0042221Presponse to chemical
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048364Proot development
GO:0048528Ppost-embryonic root development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071241Pcellular response to inorganic substance
GO:0071248Pcellular response to metal ion
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0090696
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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