result

Gene information

Detail information of g274429


Location
GeneChrStartEndStrand
g274429Scaffold_60698:HRSCAF_443784614820618887+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251948.18.6e-72myb family transcription factor EFM-like
SwissprotQ9FPE8.16.4e-56Protein HRS1 HOMOLOG 3
trEMBLA0A5P1FV786.2e-72HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G25550.148.056e-68 254myb-like transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag274429.t1
Allium fistulosumAfisC1G01137
Allium sativumAsa4G02215.1; Asa7G01207.1; Asa7G06661.1; Asa7G07491.1; Asa7G07492.1
Arabidopsis thalianaAT1G13300.1; AT1G25550.1; AT1G68670.1
Oryza sativaLOC_Os02g22020.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain17222330.72.4e-07

Gene Ontology
AccessionOntologyName
GO:0000156Fphosphorelay response regulator activity
GO:0000160Pphosphorelay signal transduction system
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0001763Pmorphogenesis of a branching structure
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0007154Pcell communication
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009267Pcellular response to starvation
GO:0009414Presponse to water deprivation
GO:0009415Presponse to water
GO:0009605Presponse to external stimulus
GO:0009628Presponse to abiotic stimulus
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009735Presponse to cytokinin
GO:0009736Pcytokinin-activated signaling pathway
GO:0009737Presponse to abscisic acid
GO:0009755Phormone-mediated signaling pathway
GO:0009787Pregulation of abscisic acid-activated signaling pathway
GO:0009788Pnegative regulation of abscisic acid-activated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009933Pmeristem structural organization
GO:0009966Pregulation of signal transduction
GO:0009968Pnegative regulation of signal transduction
GO:0009987Pcellular process
GO:0009991Presponse to extracellular stimulus
GO:0010014Pmeristem initiation
GO:0010015Proot morphogenesis
GO:0010016Pshoot system morphogenesis
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010073Pmeristem maintenance
GO:0010074Pmaintenance of meristem identity
GO:0010075Pregulation of meristem growth
GO:0010082Pregulation of root meristem growth
GO:0010223Psecondary shoot formation
GO:0010346Pshoot axis formation
GO:0010380Pregulation of chlorophyll biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010492Pmaintenance of shoot apical meristem identity
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0010646Pregulation of cell communication
GO:0010648Pnegative regulation of cell communication
GO:0048646Panatomical structure formation involved in morphogenesis
GO:0016036Pcellular response to phosphate starvation
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019827Pstem cell population maintenance
GO:0022622Proot system development
GO:0033554Pcellular response to stress
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0023051Pregulation of signaling
GO:0023057Pnegative regulation of signaling
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031537Pregulation of anthocyanin metabolic process
GO:0031667Presponse to nutrient levels
GO:0031668Pcellular response to extracellular stimulus
GO:0031669Pcellular response to nutrient levels
GO:0032101Pregulation of response to external stimulus
GO:0032104Pregulation of response to extracellular stimulus
GO:0032107Pregulation of response to nutrient levels
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0040008Pregulation of growth
GO:0042221Presponse to chemical
GO:0042592Phomeostatic process
GO:0042594Presponse to starvation
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0050801Pion homeostasis
GO:0048364Proot development
GO:0048367Pshoot system development
GO:0048507Pmeristem development
GO:0048509Pregulation of meristem development
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0048532Panatomical structure arrangement
GO:0048580Pregulation of post-embryonic development
GO:0048583Pregulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0048638Pregulation of developmental growth
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0048878Pchemical homeostasis
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051193Pregulation of cofactor metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0072505Pdivalent inorganic anion homeostasis
GO:0072506Ptrivalent inorganic anion homeostasis
GO:0055062Pphosphate ion homeostasis
GO:0055081Panion homeostasis
GO:0055083Pmonovalent inorganic anion homeostasis
GO:0060089Fmolecular transducer activity
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0065008Pregulation of biological quality
GO:0071310Pcellular response to organic substance
GO:0071368Pcellular response to cytokinin stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:0071496Pcellular response to external stimulus
GO:0080022Pprimary root development
GO:0080036Pregulation of cytokinin-activated signaling pathway
GO:0080050Pregulation of seed development
GO:0080090Pregulation of primary metabolic process
GO:0080113Pregulation of seed growth
GO:0090056Pregulation of chlorophyll metabolic process
GO:0090506Paxillary shoot meristem initiation
GO:0090548Presponse to nitrate starvation
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:0098727Pmaintenance of cell number
GO:0098771Pinorganic ion homeostasis
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1901401Pregulation of tetrapyrrole metabolic process
GO:1901419Pregulation of response to alcohol
GO:1901420Pnegative regulation of response to alcohol
GO:1901463Pregulation of tetrapyrrole biosynthetic process
GO:1901698Presponse to nitrogen compound
GO:1901699Pcellular response to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:2000026Pregulation of multicellular organismal development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2000241Pregulation of reproductive process
GO:2000280Pregulation of root development
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905392
GO:1905393
GO:1905957
GO:1905958

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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