result

Gene information

Detail information of g278292

Location

Gene	Chr	Start	End	Strand
g278292	CHR5	208491150	208494307	+

Sequences

CDS

Protein

Gene

>g278292.t1
ATGGAAACGGCAGTGATCCATGACCAACAAGAAAACAACATCCATTTATTCATAGCAGCATTCACAGTGGCCGCCACATCAGCATACTTGATGTGGTTCTGGGTCCTGACCCGTTCCCTCTCGGGCCCCCGTATGTGGCCACTGCTAGGAAGCTTACCAGGTCTGATATCCAACCGGGGCTGTATACACGACTGGATAGCTAGCAACCTCCGGTCCACCGGCCCAGCCGCTACCTATCAGACCTGCATCCTTCCCATCCCTTTTGTCGCTAGAAAGCAGGGCTTTGTAACAGTGACATGCAACCCACGTAATTTAGAGCACGTGTTGCGCACACGGTTTGATAACTACCCTAAAGGCCCCATGTGGCAGTCCGCCTTCCATGACCTTTTAGGGCAGGGGATCTTTAACTCGGATGGTGAAACCTGGCTCCTGCAGAGGAAAACTGCAGCTTTAGAATTCACTACGAGGACTTTAAGGCAGGCAATGGCTAGGTGGGCTAATAAGGCGATTAAGAATCGGCTATGGAGAATTCTGGGGGATCACTGTGAGAAGGCTGGAAGCGGTGCAGGAGTTGACTTGCAGGTAATGTAATACCACAATGACCTGTTTTTTTCATTTGTCTTTGTACATGCTTGGACATAATATGAAATGGGAACTTTCGTAAAACACTCGCTTTAAGTTCCAAAATGCACCGCCATCATTTACCAAAAACAAATTCGAAAACAGTTTTATTTTTTAGTTTCAGCCAAACCAAAAATATTTGAAGTTTCTAAAAATGCAACCACAGATATTTACACTTTGCAAAAAAAAATCAAAATGAAGTATAATTTTGGTCATCTTAACCTCCGATTAAATGAAAAAAAGAGAAAAATTGTTGAAAATAATTTCCTTGGGTTAATTCAAAACTTTTTTAAGAATGGTTTTTCATGTATTAAGTTTGAAAATAAATGACAGATTCTAATTTCCACATGAAATTTGAATTCATTATTTACTACATCATCATCTACCACTATAAGATTTTCGAGCAGAGTATCGAGTGGGTAAGTTGTGGGCAGTTTTCCTGATTGTTGGAGAGACTGTTTTTGAAAGTTTACCATTTACTGCAATTATCATAAATGGAAATAACCTCACAAATTAATTTGAACTAGCATCAATTCAAATTAATTGTGACTGATTATATAATTAATGTTATCCCTATCCATGTTATTTGGATAAATTATAATTGGAATTAGCATTCCTGGTATCTGAATATAAAAATTGAATTTGTAATAAATTCTCTAATGCGTTGGATGCTATGATACCAGGACCTTTTGTTGAGGTTGACTTTTGATAACATATGCGGGTTGACTTTCGGAAAGGATCCAGAAACTTTGTCCCCCGATTTACCAGAGAATCCATTTGCGAATGCATTTGATTCGGCGACAGAGGCGACTCTGCAAAGGTTTTTGTATCCGAGCTTTTTATGGAGGTTGAAGAAGGCTTTGGGGTACGGGACTGAGAAGAATTTGAAGAGGAGTTTGGAGATTGTTGATAGGTATATGACTGAAACAATTGATGCACGATATGCGAAGCCTTCGGACGATCTTATATCGAGGTTTATGAAGAAGAAGGATGGGAATGGGAATGCTTTTCCTGCTTCGGTTTTGCAGTGGATTGCCCTTAACTTTGTGTTGGCTGGAAGGGATACTTCTTCTGTTGCTTTGAGCTGGTTTTTCTGGACTGTCATTCAGAGACCTGACGTCGAAAACAAGGTAAATTAAAACTTATTATAGTTCTGGGTAGACATATACTCTTGTGTTCATGGGTGATCACACATGCAAGGAAACACTCTTGTTATTGGTATACTATCTAAATTCAATGCTCAGTGTCCTAAACTTTGGTTAGAATTTGATCTTCTAGCTTTCTCTCTTCACCTACTTCCCATTAATAAGAATAAGTAATGCATTTTTTCAATGCACTGATGCTTCAACAAGTTCTATAATTAAGCAATAGAGCAATATTTATCTAAGTCGAGGTTATAGATTGTTTACGAAGTAGAAATTTTCTTCATATGCTTTTAGTTGTAGAACCTCTACGCACTGACAGCTAAAGCTATAGCTTCAGAAAATAAATTTTATGATATATTATTAAACTAAAAATATTTTGAAAGCAAATGGTAAGCGATCTCCAGATATTTCAAAACCAAAACTTCCAAATTCATGTTCAAAAATCTCACCAATGGCCCAGTGGTACCACCAAGTTTGGCATTTACCTTACCTTGAAATATATTTTGCTTTATAGCTATGTTTTATAAATTTGATCACCTAGCTGCACCAAAAGAAATAATTTTGCATGCTGATAGTAGTTTTAAGCACGCTTAGTTTCTTACAGCACGTTCATGACATAAATAACATGATTTGATAAACATTGAATGCATGATTTAATTCGATATTGTTCATCACAAAGAGAGAACACAACAAAACCTTCGTGCATATAGAAACAAGATAAATAGGTTTGATTTGGAAATTGTTAATGACATAATGCAGGTGGTAGCTGAAATAGCTTCAGTGCTAAAAGAATCAAGGGGTTCAGACGCAAACAAGTGGGTAGAAGACCCTCTAGGATTCGAAGAGCTAGAGAAGCTGGTGTACCTAAAGGCAGCACTTGCAGAAACTTTAAGGCTATACCCTTCAGTACCAGAAGATTCTAAGTATGTAGTAGCAGACGATGTCCTACCAGATGGCACAGCAGTGCCAGCCGGCTCAGCGATAACATACTCAATCTATTCAGTAGGGAGAATGGAATCTATTTGGGGGGAGGACTGCATGGAATTCAAACCTGAGAGATGGTTGTCTCCTCAAGGAGACAGGTTCGAACCATCGAGAGATGCGTACAGATTTGTAGCATTCAATGCAGGGCCCAGGACTTGTTTAGGGAAGGATTTGGCCTACTTGCAAATGAAGTCTATTGCTTCGGCCATACTTTTGAGACACAGGCTTGAGCTTGTGCCTGGTCATAGGGTGGAGCAGAAGATGTCTCTCACTCTTTTTATGAAGAATGGACTTAGAGTTTATGTGAGGCATAGAGATCTTGAAGGTTTAGGAAAGTACTGTAAGAATGCAGATGCTGTGGATTGTGGTCTTGTTTCTACTGTTCTAGCAACTGCAACTGCTGCTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	OAY72361.1	2.4e-252	Cytochrome P450 86A1
Swissprot	P48422.2	5.9e-216	Protein HYDROXYLASE OF ROOT SUBERIZED TISSUE
trEMBL	A0A199V646	1.7e-252	Cytochrome P450 86A1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58860.1	70.00	0.0	760	CYP86;CYP86A1;HORST	cytochrome P450, family 86, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g278292	AT5G58860.1	510	148	2	14	523	4	508	70.00	760
g278292	AT1G01600.1	549	184	7	19	553	6	545	62.30	691
g278292	AT4G00360.1	519	161	6	23	530	10	518	64.93	687

Ortholog group

Species	Genes
Allium cepa	g278292.t1; g469300.t1
Allium fistulosum	AfisC5G04223; AfisC7G00510
Allium sativum	Asa3G04473.1; Asa4G03624.1
Arabidopsis thaliana	AT5G58860.1
Oryza sativa	LOC_Os01g63540.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	88	513	216.3	6.1e-64

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0005773	C	vacuole
GO:0004497	F	monooxygenase activity
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006082	P	organic acid metabolic process
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006631	P	fatty acid metabolic process
GO:0006725	P	cellular aromatic compound metabolic process
GO:0008150	P	biological_process
GO:0009058	P	biosynthetic process
GO:0009698	P	phenylpropanoid metabolic process
GO:0009699	P	phenylpropanoid biosynthetic process
GO:0009987	P	cellular process
GO:0010345	P	suberin biosynthetic process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016713	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0019438	P	aromatic compound biosynthetic process
GO:0019748	P	secondary metabolic process
GO:0019752	P	carboxylic acid metabolic process
GO:0032787	P	monocarboxylic acid metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043436	P	oxoacid metabolic process
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0044255	P	cellular lipid metabolic process
GO:0044281	P	small molecule metabolic process
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0044550	P	secondary metabolite biosynthetic process
GO:0071704	P	organic substance metabolic process
GO:1901360	P	organic cyclic compound metabolic process
GO:1901362	P	organic cyclic compound biosynthetic process
GO:1901576	P	organic substance biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15401	CYP86A1; long-chain fatty acid omega-monooxygenase	EC:1.14.14.80	Fatty acid degradation	ko00071
K15401	CYP86A1; long-chain fatty acid omega-monooxygenase	EC:1.14.14.80	Cutin, suberine and wax biosynthesis	ko00073

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network