Detail information of g280369


Location
GeneChrStartEndStrand
g280369Scaffold_61541:HRSCAF_44462714823361515002-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274276.10.0e+00LOW QUALITY PROTEIN: DNA helicase INO80-like
SwissprotQ8RXS6.20.0e+00DNA helicase-related INO80 complex homolog 1
trEMBLA0A8K0I6360.0e+00Chromatin-remodeling ATPase INO80

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G57300.160.400.01801ATINO80;INO80INO80 ortholog

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag280369.t1; g36649.t1
Allium fistulosumAfisC6G06585; AfisC7G06242
Allium sativumAsa3G00151.1
Arabidopsis thalianaAT3G57300.1; AT3G57300.2
Oryza sativaLOC_Os03g22900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13892.3DBINODomain375504161.51.2e-47
PF00176.20SNF2_NFamily620909229.93.1e-68
PF00271.28Helicase_CFamily1210131960.12.2e-16

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11665INO80, INOC1; DNA helicase INO80EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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