result

Gene information

Detail information of g280567

Location

Gene	Chr	Start	End	Strand
g280567	Scaffold_61553:HRSCAF_444639	516166	522120	+

Sequences

CDS

Protein

Gene

>g280567.t1
ATGGCCTCAGCGGAGGAGAATACCGCATCAACAAACTTAGTAGCTCCTACAAAATCGCCGCAACCGCCGAACCAATCAGTTGCTTCCACGTCACAGGCGGACTCTTCGGTGGCCATATCGCCGTACCCCGCCGTCTACTACCCTGGCGGCACTCCTCCCTTTTACCCCCCTCCCATGTGGGGCCCTCAGGTGTCTCTCTTGTACACTAATTTACCTCAATTGTATTTGCTTCCTTCAAATTAACTGTAATTGTTGGATTTGCAAGTAGAATATTTTACGTCATACCTCTGGGGTTGAATTAGGGGCAAATTGCCGTATTCCTATTTTTGGATCGAGTTTATCTCCTCACGTGTTTTTACCTAAGTGAAAATGTCTCCAATCGATTACCTGTAAACGATAGCGTTTGTTAAAATATGTTATTTGGTTGATCCAACTGGCTGCAATTTTATTATTCACGTTTTATATACCGATGATTTGGATTTTGCAATGTTTTGTAGCAAATGATGTCGCCATATGGGACGCCGATTCCATACTCTTCGATGTACCATCCTGTGTATGCACACCCTAATGTGGCAATGGTGGGGTTTACATAATATGTTAGAAAAGTGGATTTAAGTGAAGTTTGCTTTTAACTATATTAATACGTAATGAATATGCAGGTTTCAGGTTACCCAGCAGCTGAAGTGAGTGGGAAACCGAAGGGAGATGGAGGTAAAGGCACATCTGGATCGGCTGGTGAATATGGGTCTCATAGGCGAGTGTTTAGAATAGAGTAATCTTTGGTTTGAATTTTAAGTATTTTTTCAAAACAGATAAACTAGCATATATGTGCAATGTTATGTCTGTCAATAAATATACAAAAAAAATTTGAAAATCGCGTTCGCATTGAAAAATTTGTATGTATTCAAAATTCAAAAAGCAGCGTATATTTTATATCCAAATGATTTTCAGATATCGGCGCAGATAGTGGTACATGATTTGAAAAATTACTGTTAGAATACTGCAATTTTATCCAGATAACTGCAATTTCTTCTTCTTCAAAAACTGCATTTTAAGAGAAAATTGCAATCTTTTATTAAAAACTTCAATTTTTAGATGATGAGCTGCAATTCATATGAAAAAACCGTGTTCTTGCGGAAAGAAACTGTTCTAGAACTCACTTTTTGGATCACTGCACATTTCAATTTTTTGAATAGTTTTTTTAAGAGATCTGAAAATTTCCTGTAAATATCCGATGTTACAGATACATATATGAATTTTCAGGTATCTGGAATTCTGGATATAGATAGGGATTAGGATGTAGTTTCTGATTTCTAGATTCAAGTATAGATACAACATTGTCAGTCTCTGCCCACATCGGTGACAGGCATAGTAATCATTCTTTTTGTCTTGATCAAATGAGGTTCCCAGTTTGAAATATGAGTTTGCACTATACTTTAGTACATGGTACATAACTATATGATGTCTTAAATATTATAACTCTATTGAACCTCTTCCTTTCAAGATACTTTGTCATAAGTTTCAATATGTAAATATTAAGAACTTTGGCTGCCTTGTTGGTGCACCATTGTAATAATAATGACAAGCACCCAACGCTGCATCTGACCATTTTACTACACGATATATTCATACTAGCAAGTAATTGAACTACCGCTCTGTGCACTTTCTGTGAGTTCTTAGCTTATTTTGTGTAATGGATGCAGTGGTGGTGAGAGTGGCAGCAATGGTTCATTTAATTCAAGAGACAATGGGAACGAATCACAGGTGTGTGATAATTTCAGATGAATAATTATAAAGGTATTTCTACAGATTGGATTAGTGCAGCTTGGGTTCCATCACTTTGGGTTGGGGTTGTCAAATATTTAATATGGGAATTGGTGACGATGTTGACATAGCATCCTACATAGGGACTTTAAATGTCATGACCTTCAGTTTAAGAGTGCATTTTCAGACATAGCAGTGAGTGAACCGTGGTTCAATGAATGTGTTTTTTGGTACGTTGGACCGTGCTAGAAGTCGAAATGTGAATTTAGATGTAATATGTAGGAACTCAATTTGAAATTCAACATTTAAAGACAAAAACTTACGTTAGGGTAAAAACTTACGTTAAGGATATGGACTCAATAAGAAATGAACAGTAAAAAAAAGTTTCACATTGCTAAACCAATAAAAGATGCATATTTTTTTACATCGAATCATTTGTTCAAAGTCCGAGCCCTTTTGGACATACAATTGGTTGTATGTTGTGGACAGAATGAATGAATGAAATTAAACCCACAAGTCGGCTGACTGAACAGTCGGTCGGTTGGTCAATTTTTAAATGGTGAAAAATGTTTGTTTTTCTACATTTTGCTCCATCTTTTCTCTAAATTAAGAAAAAACTATTATTATTTTAAAAAAAAAGTGCATTTCAAAAGATTATGGCAGATGCCCTTCTTTGTGTTGGATATAAGCTCATGCACCACTGTTCATTTTCCATTGCTTGGTCAGTACGTCACACACTGTGACTTGACTCTTACATCCAATGTGCAATTTCTGACGTCTAATGTGGAACCGATCGAACACAATGGTACTGCAGTACTTATGCCATTTTATCAAACTGTACCTTCTTAGAAATTTGTGGAACCTTGACAAGTTCGATAGATATCATCACTGATTAGCTATTGTTGGCATGTGTGTGCTTACTAACCTATTCAGTCTACACTGTCTTAAATGATTATCAGTGAGACAAAAATCTAACTAAGGTGTTAAGCTCAATACTGAGTCAACCCCCAAAGATATGCTTTATTTGGTGGAACTGTACATTACTCATGTTGGCTTTGCTTATTATAATCAGGATGCTGCTCACAAAAGAACATTGGATGAGGCATTCCCAGAAGGTAACTTTGTTATTATGTTAAAAATACACAATATTTATATTACCTGAAGCTATAACAAGCAGTACCAAGATGGTTAATTTCTCTTATTTTCCCTTCACAGGGGAAGCTGCAGATCCCAGTAAAGATGCTCAAAACAATGGTATTAGTGCTGAATCATATTATAGTGGGAGAAGGCAAAGAACTGTGTCAAAACTCCCGGTTTCAGCTCCTGGGAGAGCAACTTTACCTGTTCCTCAGTCCAATTTGAATATGAGTATGAACACATGGAGCGGTCAGCACATGCCTAGGGTCAGAGAAAACACTAAATTGCACTACATTTTCTTTTCATGACAGCTTGATACAGATTTATGTGCTACTATTGATGTTTTATGTTCCATCATCATTCCAATATATTCAGTGTTCTACTATTCAGGATGAGAAAGAATTGAAGAGAGAGCGAAGAAAGCAATCAAACAGAGAGTCAGCCCGAAGATCGAGAATGCGTAAACAGGTATTGACTTTCTGAAATCTAGCCTAAAATTTTCATTGTACATTCCCACATTGACTGTACATGTATTGGCATGTTCAACATTAAACCTTACTAAGCTCTAGTAATGATGGCGCCAGACATATGTGTTTCCTGAAATATAGCCTAAACTAGGGTTTTCAAATATGTGATAAAAATGAAATATGATCATCACACAAAAAGGATAAAGACTTGATGGGCCAGGTCACTTCGTCATTTTACCTGAACAGAAGTGGTTTCAGATTGGTTATGGATATGTGTTGTATCATCATATCAGCTCTATTTATAAATGCTACTTCCCAGTCGTCTGTGCAAAAGTTTACTTCATCCTTTATATAAGTTGAATGTTTACCATTTACACATATATGCAACCATATGTTATATGTGTGCATGGTTTACACATGCATTCTTTATTATTAAGGCTTGCATCAAAATAATGTAGGCATGCAATTTTTGTGTCTGTATGCTAGTCCTAAAGCCACTACTACACTAACATGCTTAGCAACAGTAATTTTATGTAGAAATTTATATATTTAAACCTCACCTTGCAAGAAATAGATGTTTGTTTCCATGATTTTGGGGTAGAAGAGGATTCTTTCTCTTAACGGTTACTTGGTTGCTCTTACAATTCATATTAGATAGAATGTAGCGTGGCTTGTCATTCTTCATCCATTTTACTATTTGTTAAAATTGAAGATTTACGGCTGTTTGGATAGGCTATTCTTCTTCTTCGTGTTTTTTTTGGGGTTAGTTAAATAATTTTCATGGGATAATCAAGGGTTCCGAACTTATTAATTGTATAGGCATCTAAAAAAAGAAGGAAAAAAAAGTAAACCCTAGCCATGTATGCATCAACTTTTCAAGTTTTATATTGCTTACTGCATTGAAATAAAACATTTCTTGTAGGTTGCTGCTTTTCATCTTTATCCACTGATTTAATTTCCACTTCTGTTATTTTTCACGTTGTTATCAGCAAGAATGTGATGACTTGGCAAAGAAGGTAAATGAACTGAGCAGCGAGAATATTGCACTCAAAAGTGAGGTGGAACAACTGACCAAACTTTGCAGGGACCTTGAAGCAGAGAATGTGTTACTTATGGTTAGTTACCCATTTCTTTCTATATTAGCAAAATAGTTACTGGTTCCTGTTTTTTATGTTAGTATAATAAAGGTTCATGGAGCAATGTATGAATATATAAATTTGCACTTTTCCAATAGAAAACACAAGTTGACTTGCACTTTTTACCCTTTTTTTCAAATAAAAATACATGTAAATAACAATAATAACTACTCACGAATAAAGAAATTCGATCTTTTTATTTTAAAAAACTTTTCGGAAAACATAAGTTAATTTGTACTTTATATTAGAAAATTGCAAACTAATTTGTGCTTTCTGGTTTACAAAGACCAGACACCTGATTAACAGAATTGTTGATACAAGGACTTCTTATATCTAAATCAAAAACAGGGGTCTGATGCGCAAAACCCCTTGTTATTCCATTTCTTAATGTTTTACCCATTGTTTGAGATGCTGGCCGGAACGTTGGAATTCCAACCATTCCGGTTCGGTTCTGACTTGAAACGGGCCGGAATTCCCCAAAATCACGTTTTGGTCACAAATCATTAAAAAAACACTCAATTTACCTGTATAGGCAGCGCAATGGCATAAACAATAGAATTAGAGGAAGGCTTGAAAAGGCATGTGCCATGGACCATCTTGATATAGTGGCAACAAATATTTGAAAATCCCATTTACTTAGAATTTACTTATTCTATTTTAAATATGTATATTTCATTCAAAATGGGATCCTTAATTCTATTTCTATATTCTTTTTTCTAGACTAAGGACTACATTTTTACAAAAAAACTAGGAACGAAAACTGGGATCTAGTAGGGTTTATAAACAAGTTTTATTTGGTGAAAGAGAATGGAATCGGAACTAAAATCAGAGATTGCTCAGAAGTTGATTTGCGTTTATTTTTATTTAGTTCTTGGGCTTTTGTTATATCTGGGTAGAGAAACTGTTTTTCATTTGGTTTTCGGGCTTTTGTTATATCTGAGTAGTGAAACATAAAATTGAGGTTTGTTTATTTTGTGACTTGCTAAATTACAATTACACGAAACTGCATGTCCACTTCCAATTATAATTATTATACCGTCTATATAAATTTATAGTATTTATTGGTGTATTTATAAACAAAAATTCCGAAACACTTTGAAATTCAGCACTGGAGCTATAATTGAATTTTCAAAATTTGATAATTGAAAATGACCGGAACGAAAATTGGAATTTTGAACCTTGGTTTTACCTTAAGATGGTCTTTAATAGTTTTGGCCATGGACTTGCTGCTATAAGCAAAGATACAGATAACAGTTTCAAATTTACGGAAATTAACAAACAGAGTATAAAACATAAAATAACAGTAAAAGCAAAAATGTCATAAACTCTTTTTACACAAACTCCCAATTTATTTATTTACCAATTTACTGTGTTATTCCATATTGCTGATGATGATTTTCTGCTTTTGCTTAAAACAGGAAGACGTGAAGCGCGTGGCTATGACCAGCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256629.1	2.3e-28	DNA-binding protein EMBP-1-like
trEMBL	A0A5P1FBN3	1.7e-28	BZIP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G36730.2	37.66	6e-35	144	AtGBF1;GBF1	G-box binding factor 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g280567	AT4G36730.2	308	129	15	23	293	9	290	37.66	6e-35	144
g280567	AT4G36730.1	308	130	15	23	293	9	292	37.99	2e-34	143
g280567	AT1G32150.1	334	128	14	27	286	43	358	34.13	2e-27	120

Ortholog group

Species	Genes
Allium cepa	g280566.t1; g280567.t1
Allium fistulosum	AfisC1G05604; AfisC1G05649
Allium sativum	Asa7G03833.1
Arabidopsis thaliana
Oryza sativa	LOC_Os03g59460.1; LOC_Os07g10890.1; LOC_Os07g10890.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07777.8	MFMR	Family	3	88	34.1	2.6e-08
PF00170.18	bZIP_1	Family	221	283	68.7	3e-19

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001067	F	regulatory region nucleic acid binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043565	F	sequence-specific DNA binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09060	GBF; plant G-box-binding factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network