result

Gene information

Detail information of g281842

Location

Gene	Chr	Start	End	Strand
g281842	CHR7	120119459	120124396	+

Sequences

CDS

Protein

Gene

>g281842.t1
ATGACATCACTCTATCTGTTGTTCCATCCAACATCATCCCCCCACGTGTCCTATTCTTCAGTCCCACTTCTGTTATTTCTCCCTTCTACCAGGGGTATTTCCGTCCTTCCCTCATCCACTTGTATTTATATCTGCTCCTTTTCTACTTCTACCTCCATTCCGGTTCCCCTCTCCGTCAAGTTCAACGGCGCTTTTCTCCCGTTTTCCGTCAACTATGACGGCGCCCAACGTCGTGTACAAGGAAACCATGAGAATAATATTTTTGGTACAGTGACAGCCAGTCGCAATCTTTGCCTGTTCTCTTTTCTCTCATGTAACCTTTTGAGGTAACTTTTTCTTTTATTTTAATTTTTTTCAAAGTATTTTATTCTCTTTATCTTCGTTTTGTTTGTGGCTCCTGTTCTTTACTCCCTTCATATCATGATTCTATAATACACAGTACATGTGATCTGAAATTATAACCCTAAAAAGAACACACACTTTTCACATCAGTTCTCTACATGTTTGCATGAAAAGAGTGTATTGTATATATTATATGTATGTATGTAAATTTGGATGAATATGATTCTACAGTAGTAGTAACACTGCAAACCCTATTGTCAAATTACTGTACATATTCAGTTAAATCATATATAAAAAGGTTGTGTTTTGTAGTGGGATTTAGCCATGACATTCTTTTCATGATTTTTCCTCATCATCTTTGCCTCTTTGGTGCTTGTTTCTGATTCCCTATCTTATCTCCATTTGTTTGCACTATACATCTACCTTGACTTCCTTTAATTTTCTTCTCCTTTCAAAAATTACATAAATCACAGCTTTTCTTTTTTCTTCAGAACAAAATTAGTTAAAAATCCGAAGATGTCTGAAGAGCCACTGCATGTAGCGCAGAAGAGTCGTAGAGACAAGCTGAGGCATCAGTTTGTTTCAGATAATGAAAACCCTAATCATGAATTTGCCTTCAATTCTGAAATTCTTGATTATAGTACATCTAACGCTCCTCAAAGTTCCTCATCTTATGATTGGATAATGAATTGCAGTGGTGCTAGTCTTCCTTTGTTTCCGCCTCATATATATCCAGAAAATCAACAAAATATGTCTTATGAAAATACGCTTCAAGCAATGATTGCTCCTTCTTGCTCGAACTCTTTAGGCGGAGCTAATACCGATCATGGTGGTTACTCTATTGACGGCAAAGTTGGTAATTTAAGTAGAACCCAAGGCTTGTCTTTGTCACTATCATCAAAACCGAATATTGAATATGTTGGAGCATCAAATTGGCCGAATCCATCGAAATTATTGATGGATTCTAGAAGTTGTGTAGGGCCTCTTGGCCCTTTTACAGGTTATGCTACTATTCTTAAAAGTTCTAAGTTTTTGAAGCCTGCACAACAGCTTTTGGATGATTTTTGTAACGCGGTCATTGGATCTAATAATTTGATGATCGAAAGTAATTCGGAGGCGGCTGCCTCATCGATCTTTGGTGAAGAAAGAGATGGAAGTGGTACAAGGAGTTGTATAGTCGGTGGTCAGGGAGCTGATATTCAACAGATTAAAGTGAAGTTATTGTATATGCAAGATGAGGTTTGTTATATGATTATAAACTTGTTCTTACTTAATGATAATTATAATAACCCTTAACCATATGAAATAATTATTAGTAGTTAGTAACTTATTTGCCTTGTGATATTATAATAGATTGAGACTTGGTTGTGTGTGTAAAATTGTTTATTGTTATCTATATCTTGGATTATTGGACATTTTGTGTGTGTGTAAGGATCAAATGGTGATAATTATTATCAAAAAGGTAAAGTTGTGCTGAACATATAACCAACTTTGATCGTCATAGCGATAGTTCCAGTGATTATAATTACTAGTAGTCTACCATCTGAGTTGCGTTTGATATTATGTTTTAGACATTAATCTAAGTATGCAAAGGTTCCTACTACTTTATCTTGTGTTAACCTTAAACTGTTACTTGAAATCTTTTAATTTTTACCAACATTACTATATCTCATTGATATATGCTACTGCTTGCTTTAATTGGATTTGAATGTACAATCCATCATATCGATAAGCCTGCCGATTAATTGGATCCGCCTAATTAATAAATGCATGCAGTGCCCGTGCACATACGCAAGTTATGTTTGTCTAGAAATTAATCAAGGTATGTTTGGTGTATGGTTTTGTACACAGCAAAATTTGTTTTCCACTTTTAGGTTTTTTTGAAGTAAATCTTAACATCTTATCTGATAATGGTTTATTAAAATAAATCCATTTCAAAGTCATTTTTCTAGCTTAGGTACTGCTTTTATAATAATCAATCAACAATAATCAATGTATGGCAAGGAGCCGTTATTTTATAGTTTTCTCCATATTTCCTTTTTATCTTATCAGCAAGTAAATTTTGTTTTGTTGAATTAATTCATCGGGTTTGATGGCCCTGGATTAGTTTTATATTAAAATTTATTAGTTAGGGTTAAAAGTTTCTAAAATATGTTTTTGATGAACACAACACATAACATGCAGTATTCAAATAAAACATGATCAATTGTGTTTTTATTTGCTTCTATTGCACATATCTACAAGTATACACTTTGGTGATTAAATCACGTCAAATCCATTTTAGTTGTGTCTTATTGCATGGTTATGTAACTTAAATTCAGTCAGTTGATGATTGGTTTGTTTCAAACATTTTAGCTTATATGCAAACCTGAATTCTTCATTAACCGCAATATAGTCTATGTAGTGGATCTTCTTACTTTTTGTGGTTACATTCATTTATTATACAAATTTTGGTTAGCCATTTGAGTTCAGGTATAGAAAAATACTTCCTGAAAAAAGCAATTTAATTTGTCGAAGGAAACATAACATGTGCATTTTAAGGGATGGTAACACAAGTCTTTCAGCATGTAGGCAACTTAATATATGTTTATGAACCAAATTAGGTATGTTATCATGTGGGGTGTAATTGCACACTTCGAGTATTTAAATTTAATAAGTCGTCAACCACGTGAAATGGAATCTGCATTTAATTCTACACACCTATTTGTCTTCCAACCATGGCATGGGCAACAACTCTCAACTGTTGGAATAATCTTAGTTGAAATTCACTACATGCATTAAAATATACTACATACATACAGTGAATCCTGTTTATTTGTACATGTGCATTTAACTTAATCTACAACTTAAGGTATGCAGAAGATACAAGCAATACCACCAGCAAATGCAAATGGTGGTGTCTTCCTTCGAGTCTGTGCCAGGTCTAAGTACAGCAACTCCTTACACCTCTCTAGCTCTGAAAGCAGTGTCTAGACAGTTTAGACACATCAAACATGCAATCTCGAATCAGCTACAGAACATGAGTAAAATGCTAGGTGAAGAATATTTCATGTCAACAAGTCCGACGTCAAGCTCTAGAGGCGAAAATACTCCTAGGTTAAAACATGTAGATCATCAAAGTTTGAGGAGACAGAAAAGAAATGAGGTCAATACAAGTATAGGATACCTTGAAAATAATCAGCCTGTCTGGAGGCCTCAGAGAGGATTGCCTGAGCGTGCAGTTTCTGTTCTTAGAGCTTGGTTGTTTGAACATTTTTTGCACCCGTGAGTTATATGACCTATTTATTTTCAAAAGGAATATATAGTAATTTTTTTTCAGTGATTTCGAACCTAAGATCTTTGTACACAGTTAAAAATGTCTTACCATTTTGTTGGTGGTCGTTGACAATCCATGAGTAATTCAGCTGGACAGTCAATAAGTTAGATAGTTGCTTTTTTTCACTTTTTTTTCTTTTCCTTTTGATGTTTATTGTCCAGGTATCCGAACGACAGCGATAAGCATATGCTGGCATCTCAAACAGGTTTGACTAGGAATCAGGTGAATGTCTTTTCTTTTATTGTCCCACATAATTTTCCTGCTACTTTTTTGCCCTTGAGTCTTGCTAAATGAGACTATGTTAATATAGGTAACAGTTTTTTTTTTTTTTTTTTTCCCGCTTAACATTTTTCACTACCAATGTTTAGTACATATTTTGAAGGTGCATTGCATGTATAAGTATTTGATAACATATATATAATCAATCAATGTATTAATATGTAATCTAATGTTGGTACATAAAACTTGCAGCTTCCACCAATTGTCCATTTTGTTTGTCAAAATGCAAATATGGCTTCTTCTTTTTTTGACTCAACATATATCATTATTAGCACCCTACTGTCGCTTTATATTTAGAACTTCATTGCAAGTATACGTGTACAAATTAATATTTCCTTCAGGTAATTATGCCATAGATGAGAACTGTTTATATGATTTATCTAATCGATCAAGGAATCAATATATACTCTAATATTGATGCATAAATCTTGCTCCCTTCAACAAATGCGCATTTTTTATGTTTTATAAACCTACCTGGATATTTCTGGCTATGCTACATGAAAATATAATACATGGAAACAGTGATCCCTCATGTACATTTCATTTTATTTCAACCGAAAAAACAACAGGTTTCAAACTGGTTCATCAATGCAAGAGTAAGACTGTGGAAACCAATGGTAGAAGAGATTCATATGCTAGAGACAAAAGGAGTATCGGGAATGGACCTAAACAATGCATCAAAGAGGAACACTAGAAAGTCGATCATAACTGAGGGTGATCCCGAGCCTGAGTCCCAGTCTAACAATAACAAGACAGCTATCGACTACTCAAGAGCAAATAATAATGAACTGGGATCAAATATAAACCCAATGGATCAGCAATGGCACCAAGAGAAGCGGTTGAGATTGGAAGACAGAGAGGAACGGTTGCTGAGCTTTGCATATCATGGTAGCATGGACATGTCCCTAACTTTAGGGCTGGGGCAAAACGATGATCCTCAACACCAGCATCAGCAAATGGTGCATTTTGGAGGCCAGATGCTTCATGATTTTGTGGGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250871.1	4.8e-119	BEL1-like homeodomain protein 9
Swissprot	Q9LZM8.1	8.4e-68	Protein VAAMANA
trEMBL	A0A1R3L583	3.5e-119	Homeobox domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G27990.1	41.13	2e-71	267	BLH8;PNF	BEL1-like homeodomain 8

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g281842	AT2G27990.1	389	173	8	272	659	251	584	41.13	2e-71	267
g281842	AT5G02030.1	315	143	4	239	541	115	419	47.62	1e-68	258
g281842	AT2G35940.3	274	92	7	284	531	190	446	50.73	2e-62	237

Ortholog group

Species	Genes
Allium cepa	g281842.t1
Allium fistulosum	AfisC7G03967
Allium sativum	Asa0G00959.1; Asa0G04566.1; Asa0G04568.1; Asa3G01814.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07526.8	POX	Domain	283	409	131.4	3e-38
PF05920.8	Homeobox_KN	Family	488	527	63.0	1.5e-17

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0001763	P	morphogenesis of a branching structure
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0007389	P	pattern specification process
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009791	P	post-embryonic development
GO:0009889	P	regulation of biosynthetic process
GO:0010016	P	shoot system morphogenesis
GO:0010073	P	meristem maintenance
GO:0010074	P	maintenance of meristem identity
GO:0010076	P	maintenance of floral meristem identity
GO:0010077	P	maintenance of inflorescence meristem identity
GO:0010223	P	secondary shoot formation
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0010229	P	inflorescence development
GO:0010346	P	shoot axis formation
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0048646	P	anatomical structure formation involved in morphogenesis
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019827	P	stem cell population maintenance
GO:0022414	P	reproductive process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0048367	P	shoot system development
GO:0048507	P	meristem development
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0080006	P	internode patterning
GO:0080090	P	regulation of primary metabolic process
GO:0090567	P	reproductive shoot system development
GO:0098727	P	maintenance of cell number
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network