result

Gene information

Detail information of g28622

Location

Gene	Chr	Start	End	Strand
g28622	CHR3	77942430	77949547	-

Sequences

CDS

>g28622.t1
ATGGGTAGTAGTGACACAGAAGCCTCCGAAAAAGCGCCAAAACCTTCAGCTTCACCTCAGGATCAAACTCCAGTTGCTCCAGCATATGGTGATTGGTCTAGCTTTCAGGCATATTCGCCAATTCCACCTCCTGCGTACTTTCCTTCACCCATGGCATCGGGTTCCCTGGCTCAGCCTTACATGTGGGGACCTCAGCCTGTCATGTCTCCTTATGGTACACCTCCTCATCCATATGTCATGTATCCTGGAGGAATGTATGCTCATCCTTCTTTCCCTCCGGGTTCACACCCATTTAATCCATATGCAATGCCTTCTTCAAATAACAACACTGAAACCATTGGAGCAGCACAAGGAGGCGGCGAAGGTGAGGGTAAATCATCTGAAAGCAAAGAAAGAAGCCCCATTAAGAACTCTAAAGGAAGTTTGGGAAGTTTAAATATGATCACAGGCAAAAATAATAATGATCTTAGTAAAACTTCAGCTAACGGCGGCTTTTCTCATAGTGGTGAGAGTGGAAGTGGAGATTCATGCGAAGGAAGTGATGCCAATTCACATAACGAGGACTCTCAACCAAAAACATCCGGTGGCCAGGACTCCATAGATGGGTCACACCAGAACGGTAATCATATGCTTGTTTCTCAGAATGGAGTGAACCATACACTTCCGCAGACTGGAGGGAACCAGATCATACCAGCTCCTATATCCGATGTGCAAAGCTGCGCTGTGGGTCCCACAACAAACTTGAATATAGGAATGGACTACTGGGGTACTTCAACCCCAACATCTATTCCTCCAGCACAACAAAAAGTGCCTGTTGCTGCAATTGGAACTATGGCCTCTGGCGGTCCCTCTGAACCATGGATGCTGGATGAAAGAGAGCTTAAGAGACAAAAAAGAAAGCAATCGAATAGGGAATCTGCTCGTCGATCCAGACTACGCAAGCAGGCTGAATGTGAAGAACTGGCTCAGAAAGTTGATGTTTTGAAAGAAGAAAATGCTTCTCTCAAGGCAGAGTTAAACCGAATAAGGGCTGACTATGAACAGCTTTTTTCTCACAATGCTCTACTTAAGGAAAAACTTGGAAATTCTTCTATCGACATAAATGGCCAAGATGACACAGGAGTTTTTATACAGTTGATAGTCAGCAACCAGCAATATTTCTCACTGACTTTTCTCCCTTCGACTGGCTTTTTTTAA

Protein

Gene

>g28622.t1
ATGGGTAGTAGTGACACAGAAGCCTCCGAAAAAGCGCCAAAACCTTCAGCTTCACCTCAGGTTCCTAATTATTATGCGATTTGAGCTGTTTAATATGATTTCGTTGAGAAAAGTTTATGTTAAGATCGTAGATTTTATTTCCATGATAACACTAAGAGATTTGTTATATATAATCTTGATTGATAGTGGTTAAATTTAATCTTTGTTTGTTTGGTTGAATATAGGATCAAACTCCAGTTGCTCCAGCATATGGTGATTGGTCTAGCTTTCAGGTATTTTTATTCCGAATGTTTCCATCTTCATTTATGAAAATCTGAATTTAGGCTAATAATGTGTGACTTTGATTTTAGCTATTTATATTAGTAGTGGTCACCGATGTATTTATGTACAATTTGATTGGATATAGGCATATTCGCCAATTCCACCTCCTGCGTACTTTCCTTCACCCATGGCATCGGGTTCCCTGGCTCAGCCTTACATGTGGGGACCTCAGGTGCTATTTTATTTATAGTTGTATTTCATTAAAATAAATGCTGGTTTATATGTATTTGTATATGTATTTTTATGCTTTCTGATGTTAAATTTGTGTAAAAGTGTTTGAAGTCAAGTGCTAAAATGCAAGTAATCAAATTTGGGCTATATGTTACGTAAAGACCAAAATACATGAATTTTTGTTGTATTAAATGAGTAGTTTTTGAGTCCTTGACTGTAATATATTTCAAGAACGAAGGAGGATGAAACAAGATTTTAGAGGTAAAAGTGGTTCACATTTATGAACATGAGTCAATAAAACACATGTTGCATGAGAGAGGAAAATTTGATCCTACCAAGTGACCAGAAGAGCCGCCTTGGTGGTGAATTGCAGGAAACAGCAGTTAAACTGTACTGTTGGAACAGTTGAATTTTCGTGCAAATAAAGCTCTTTCTTTAAACAACATCAAGGTCTTGAAACTCTTATATGATTTTGATGTCAAGTGAGGAAGTGAAAGGGAGTATGATATTATCCTTGAAGATGAGTAATGCATCTGTGATACAGGATCGGTTTGTCTTAGTTTGATCCAACATCCATGCGACCTCAATGGTTAAATTAGATACGTATATTATTGTGTGTGGGTGCTGTATTTTGATTAAGACACTATGTGTATTTAAACTTCTCAATTCATATAAATAATAACACGTCCCTTCAAAGAACATGGAGGTTTACTGATTCCTTACATGGTTCATGTGCCATGCGAGGTAATGTGGCTATAGGGAAGACACTATTGATCTTGGACATGAGCAATGCAACTCTGATATTGGACTGATGCCTTTTGAGAAATAAGGCATCTTAGGTCAATCCATGTGATGATAATGTATACATTAGATATGTTTATGTATTGTTAGTGGTTGTAGACTTGTAGTGCTTAGCATAAAACATAATCTTTATTTAAACTTCTCAATTCATATAAATAATAACTTGTCCCTTCAAAGAACATGGAGGTTTACCGATTCCTTATATGGTTCATGTGCCATGCGAGGTAATGTGATTAAGACACCATCTTTGAGAGCTTCTCAATTCACGTGCAATTAGATACACATGATTAGTTGCCACAAGCTTTATATTTTGTCTTTAGGATGTATATGCAACTTATTTTCATTATTTTACTTGATTTTCAGCCTGTCATGTCTCCTTATGGTACACCTCCTCATCCATATGTCATGTATCCTGGAGGAATGTATGCTCATCCTTCTTTCCCTCCGGTAAATTCTTTCGTTCTTGGCTCCATGTTCAGTATTCTTTCTTTCAGTATTTTTTGTTTTGTTTTGTTTTGTTTTTTTTGTTTTGATGCCACTAGCAATTACCTATTTATAATTGAATTTTGTCAGGGTTCACACCCATTTAATCCATATGCAATGCCTTCTTCAAATAACAACACTGAAACCATTGTGAGTTTTCTGCATAAATGATCCTCTGAGGCATCTACATATTGATTGAACGTGATTTTTTTTTTTAAACTTTGTTTCACAGGGAGCAGCACAAGGAGGCGGCGAAGGTGAGGGTAAATCATCTGAAAGCAAAGAAAGAAGCCCCATTAAGAACTCTAAAGGAAGTTTGGGAAGTTTAAATATGATCACAGGCAAAAATAATAATGATCTTAGTAAAACTTCAGCTAACGGCGGCTTTTCTCATAGGTCGGTAACAAAGCTTGCAAGAACTAATCCGTTGTTAAATTTATATGCACTTCATTGATACTATTACTGATAAGAAGGATATTAATATATGCAGTGGTGAGAGTGGAAGTGGAGATTCATGCGAAGGAAGTGATGCCAATTCACATAACGAGGTATAACTTAAACTTATATACCCCTTTTGCTCTAATTTTTCATAATGTTTTAGAACCTTAAACGATTTATACCATTATGTTAAATAGGACTCTCAACCAAAAACATCCGGTGGCCAGGACTCCATAGATGGTAACTAAAAATCGTATTCCCCCTAGAATATATAATCTCAAATTATCTTAAGACATTCAAATTTGTCATTCCTGAAGCAGGGTCACACCAGAACGGTAATCATATGCTTGTTTCTCAGAATGGAGTGAACCATACACTTCCGCAGACTGGAGGGAACCAGATCATACCAGCTCCTATATCCGATGTGCAAAGCTGCGCTGTGGGTCCCACAACAAACTTGAATATAGGAATGGACTACTGGGGTACTTCAACCCCAACATCTATTCCTCCAGCACAACAAAAAGTGCCTGTTGCTGCAATTGGAACTATGGCCTCTGGCGGTCCCTCTGAACCATGGATGCTGGTACATTTTTTTATGCAATTATGCTAATGCTTCTATTTGTATCTTTTATGTCTTAATTTTATAATAACCTATTAGAACCAAACCAATTTTATTTTTTGAGTATTATAGCAGGGTTTTTCGGGCGGGGTGGGTGGTGTTAGGGCTAAGCCTAATATCTGTATTAGTATCATGATGGTTTTTACAAAAGAGAGCATTTTTCTTGTTATGTTTAATTTGAATCAGAACTTACGGTAATCTTCGTATAAAGCAACTCATTATATAAACTGTGATGTAGCATTTTCTACGTTTCAAAATATTGATTTGACCATCTGTGATAGCCTTATTAGAGCTTATCGAGCTCAACATGTATCTTGACATGTGGATAAGTGGATTTGAAACATTGCCTTGAATGCAGGATGAAAGAGAGCTTAAGAGACAAAAAAGAAAGCAATCGAATAGGGAATCTGCTCGTCGATCCAGACTACGCAAGCAGGTATAAAGCATTACTGAAATCAAGAAAAAAGAGTTGGTGCTTATAGTTATTGCTCATAAATCACAAAGCCACCCTACGTTCAATGATGTATCTTATATCATCCGGCCTCTGATTTTTTAATATTCTCAAATATTTACAAACTGTCTGTGCACTTCTTTTCTTCGATACTACAATGACCATTGATTCTTTTTTCCCCCCTCTTTTAAACAGTAAAAAAACACATAATGTTTGCACTTGTGCTTTTGCAAAATGTTACACATTTTAAGTGCAACATATTTGGCTTTTACGTTGTTTGTGCATAGATTATGCAATTTGTGGTTACATTCAAATATATAAAAATAATTTGCATTTCTCATACAATAATTATGCAATTTGCACTTTTATAAAATGTCCGCACATTTTAAAGTTGCACGATGTTTGCATTTTCATGAAATGTGTTTTTTTTGGCATTGTTATTATTAATTATTTTTGATTTTACATTGTTAATTTTGTGAGGCTCATACCATTCGCGGTTCCAAAGTTTATATCTTCATGAAATGTGCATAACGTATACATTTATCTTGAAATGTGTTTATTTCGTACATTTTCATTGCTAAGTATTTAGATTCAGTATTTTTAAAATTGATTTTATGCGTACAAATTGCAATGTTGTTTTAATAAGTGTCCTGCTTAAATTAAGTATCACTCTTGCTATGAATTTTTTCCTTGCAATTTTGTTATATTTTATATGTTATCTCTGGGAAGTGCACAAATTTGTATTTCCTGCAGTTGTTAACATAGGGTGTTTTTTTTCTAATTAAATACACAGTGTCATTTTCGTAGTTAAATATGCCAATTTTTTTTAACCAATGCTATTCTTTAACATGGTAGTATTAACACGTGCCCATTGGCACAATTACACATTGGTAAATGGTAATGGTACTAAATGCATTAATATGTGTACTCGTGAGTACCAATTGATGTATGTAATCTAGGGCTGCCGGCGGATCAGATCCAATGGAGTTAGACAATAGTCAGTCTCCAATTTATTGTTGGATCTTAATTTTTTATCTGCATCCGATCCGACCAACCAACCTAATAAATCCGATTCAATGCTTATTTCTTGGATTAGATTGGATATTGGTTATTGGTTGTGGTGAAATTTCCAAATTGATATGTACTTCTGGATAGTTTGTATGAGAGTCGTTAATTTATATGTTAGATCTTATTTTATCAAATACAATATTTAATACATACTTTAGAAATATTTGCTTTTAATTGGACATAATATAATATTCAATTTTCATTGTCTAATTAAATTTCATTACGGATTCATAACATAATTTTAAATAGTTCGTGTTAAAAGTTTAAGACTGTAAATGTATTGTTTGTTGATTGAATGGATAAATTATCTTCTTGTCGTAAGTCAGACGAAAATTGAAATTAAACATAGAATATAATGTACTATAATGCTATCTTAATCTAGCCTTTAATTGGGTTAATTTAGATTGAAAAAGATTATTTTATCAACATTTAACTTAAGAACCGCAGAGCAACTGATATACGTCTGGGTAGTTGGACAACAACAAAAAATATTATATTAAACTTTTTAAATATAAGTATTTAAATAAAATAAAATAGGTGTTTTAAAAGTTAAATTTTATACAAAGATATTAAAAAAAATAACGAGTTTAAAATTCAAAGTAAAACATGAAAAGGTACCAATCAAAACTAAGTAAAAAACCATAAATGAAAAGAGACTGCATCATAGTTGATCAAATCTATCAATTTTAAATCAAAAGTGGATATTTAGGTAGTGTTTGGTTTGAAAATGATTTTGTGTTTTGCATTTTCAACAATGTATTAAAAATACACAAGAGATGAGAAGTGAGCGGAAAACGGTCGTTTGAAAAATAATTTTAATATATAAATTTGAAAATAACATTTTCTTGTTCTCGGCTGTTTGGGAAGTATCAAAAACTATCTCCTCTCTTCCCCATCCCCTTTGTTTGAATGATTAGGATTTTACGACGCTTCATTCTTTTCCACTCCATTTGACATACGAATTGACAAAATATAAAATTCATTTTCAAGCCGAACACTATCATAGTTTTCGATAATTCAAATTAAGTTGGATTGGTTATTCAGTCGAATTTGAGCTTAAGGATTCATCAACCGATCAGCCATGATTGAATTTTTACAATTTGAATCCAAGCCAATCCAATTTATAAATTGGGTTGGTGTCTATTCTATCTTTTTTGGAGTCTATTGGATTCAGTCCGCTAGATAATCGATCCGTGTGCACTCCTATGTAATTGCAATTACTAATTACTAATCCATTCATATTGATGATTGTGATTATCAATGCATGATATAAATTAGCTGCTCCCAAAATTCCCTATCCCCATGTATCTACCAAATCAATGTTTGATACACAATCCTATGTTTTGCAAATAGTTCCCTGCAATAATGTAGATTAGACATGCGTAAAAAAAAAAGAGGTTTGCGATTGGCTGGGCACAAGTGATAGGGAATTTTAGGATCAAAAGAGTTGAACTCATGAAGGGTGTAGATCAGCTGGTCCCAAACTGTTCCCATGTGCACATCCAATCAACATTTGACCCACGATTATATATTTTGCAAATAGATCCATGCAATAATTTAGATTGGATTTTTTCTGGAAAATAAAATAAAATAAGGATTATGATTAGCTGGGCACACATGGGTATAAAGAATTCTAGGGCTAGAAGATTTGAACTCATGAGTGCATTGGATTGCAATTACCATTATGTTCATACATATATGTCCAATTAGTACACGTTAACATTACCGTAAGGAATTTACTAACACGACTGTACTAAAACTCGCCCAATTAATGGTTTAATTCACAGTGGTGGACCCCACATTTCACTTATTGCATGAATAAAATAATTAAATCTTCCAATCGAAAAGCGAGTTGAGAAGAGTGAAAGCAGCAGGCGACAATAACAGGGATTGTTAGTCAAGTCAATCTGAAAGCATGCAATTTCAATATGTGTGCAGTGATAATTTCTTAATTAATTATACTCGATGAAACTGAGCACCTTTGACTTTAAAATTTGGTTTTTACTTTGAGCAAGTAACATGGAAGGATGTAATTTTAACAGTGCTAGAAATGTTAACATGTGTCCACTGGGTGCATCTTCAGGATTTATGCAAGTTTATTGCTATTATTAATTGCAAACAATTAATTTCAATATAAAGTGTAGATTTTTACTTTAAGTTTTAATTTATATCTTCGTGTATAATAAACTCGTTTTTGTAATAAATGAACCTTCTGTCTTAATACAACAACAACTAAGCCATTATTCCCAAACAAGTTGGGGTTGGCCGGAGATGGAACCCAAAACTAAATAACAAAATCAATTTAAAAGTTATAATATTTAGGTGAAATTTATTTGTGGTTCTGTCTTGATATTTCGTACATACAGGCTGAATGTGAAGAACTGGCTCAGAAAGTTGATGTTTTGAAAGAAGAAAATGCTTCTCTCAAGGCAGAGTTAAACCGAATAAGGGCTGACTATGAACAGCTTTTTTCTCACAATGCTCTACTTAAGGTGACAAACCTTTACATTCTCTTTATTTAGTCAGATTTTGCTTATATACATGCATATTTGCATAATACAGGAAAAACTTGGAAATTCTTCTATCGACATAAATGGCCAAGATGACACAGGAGGTCAATAAGAAACTTTGAACCAATCTATACATACTCTCACTCACATTGCCTAGTATGATATGGAAAGGAGGACTATAGTTTTTATACAGTTGATAGTCAGCAACCAGCAATATTTCTCACTGACTTTTCTCCCTTCGACTGGCTTTTTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010920017.1	3.6e-85	bZIP transcription factor 16 isoform X2
Swissprot	B6E107.1	3.6e-58	bZIP transcription factor 1-B
trEMBL	A0A6I9RA51	2.6e-85	bZIP transcription factor 16 isoform X2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G35530.1	54.49	5e-90	328	AtbZIP16;bZIP16	basic region/leucine zipper transcription factor 16

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g28622	AT2G35530.1	345	127	10	31	360	43	372	54.49	5e-90	328
g28622	AT1G32150.1	383	149	10	1	360	1	362	49.61	3e-79	292
g28622	AT4G36730.2	370	140	14	1	360	1	287	37.03	2e-38	157

Ortholog group

Species	Genes
Allium cepa	g28622.t1
Allium fistulosum	AfisC3G06384
Allium sativum	Asa2G05361.1
Arabidopsis thaliana	AT1G32150.1; AT2G35530.1
Oryza sativa	LOC_Os03g13614.1; LOC_Os03g13614.2; LOC_Os03g13614.3; LOC_Os12g13170.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07777.8	MFMR	Family	1	92	91.2	4.1e-26
PF16596.2	MFMR_assoc	Disordered	131	264	119.3	1.4e-34
PF00170.18	bZIP_1	Family	291	352	72.0	2.9e-20

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0009889	P	regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009893	P	positive regulation of metabolic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010557	P	positive regulation of macromolecule biosynthetic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010628	P	positive regulation of gene expression
GO:0045935	P	positive regulation of nucleobase-containing compound metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043565	F	sequence-specific DNA binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051254	P	positive regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1902680	P	positive regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09060	GBF; plant G-box-binding factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network