Detail information of g289794


Location
GeneChrStartEndStrand
g289794Scaffold_62794:HRSCAF_445880125725128595-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265367.17.9e-64MADS-box transcription factor 32-like isoform X1
SwissprotQ8S151.11.7e-55OsMADS32
trEMBLK9LYZ83.9e-57OsMADS32-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G57230.135.327e-23 103AGL16AGAMOUS-like 16

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag183622.t1; g183623.t1; g289794.t1
Allium fistulosumAfisC5G01427
Allium sativumAsa0G00095.1; Asa0G04737.1; Asa3G03177.1; Asa3G04561.1; Asa3G04562.1; Asa8G00122.1; Asa8G00123.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g52680.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain529980.05.7e-23
PF01486.14K-boxFamily12920935.76.8e-09

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.