result

Gene information

Detail information of g290173

Location

Gene	Chr	Start	End	Strand
g290173	CHR3	309882274	309884944	-

Sequences

CDS

>g290173.t1
ATGGCAGAAGCTTTGAAAAATAAAGAATACATAGTTCAAAGCAGCTTCAAACTTCAGCAAAAGACTGAAGAGTTCAGGGAGTGGAACCAAAACATACAGAAAGGCGAGAATGAGATGGACGTCGAGGAGGAAATCATTCAAAACGCTGCTGAAATCATGGGGAAAATCACCTTCGGCAGCATCAACGACGAAGATGGGAAAACTTTGCTACAAAAACTACAAGAAGTGCAAGCAAGGCTCTTCAAAACGAATCGTTTAGTTGGAGTGCCTTTTAGCGGATACGTCCACGACCCGAAAGCGGAGAGGGAGACCAAAAGGCTTGGCAAGGAAATAGACTGGCTCGTGCACTCCCTTATCGATTCCAGAACCGTTCATCATGGTCTTTTGGGTCTACTTCTTGCGGGCAAGGAAGTTGATAGTGCATGTAGCAAGTTGAGTAGGGAGGAGTTAGTTGATGAATGCAAAACTTTCTTTTTTGCTGGTCATGAGACCACCGCTTTGGCGCTTACGTGGACATTGCTCATGCTTGCTTTGTATCCGAAATGGCAAGATGTTCTTAGAAAGGAGATTGATGAGGTTTGCCATGGAGAAGCCCTTGATGCCACCATGCTTCCTAAACTCAAACAAATGGACTTGGTGTTGAACGAAGTTCTAAGACTATATGGTCCAGCGCCAAACGCGCAAAGGCAAGCTCGAGAAGACGTGCAAGTAGGAAACATAGTGATTCCAAAGGGCACAAACATGTGGATAGACACTGTGGCGATGCACCACGAAGAGTCACTCTGGGGACGCGACGTCTACGAATTCAAACCCCAAAGGTTCAACACGACCGGTTCGCATGGTGCATGCAAGCATCGGTTGGGGTTCGCGCCCTTCGGGTTTGGAACCCGGCTCTGCATAGGCAAAAACCTTACCATTGTCGAGTACAAGATTGTGTTGAGTGGCATTATCAGGAGGTATGGGTTGAGTGTTTCTGAAAAGTACGTGCATTCTCCTAAGATCATGCTTACTCTTCGGCCTTCTCATGGAGTGCAGTTGGTCCTTCACCCACTATAG

Protein

Gene

>g290173.t1
ATGGCAGAAGCTTTGAAAAATAAAGAATACATAGTTCAAAGCAGCTTCAAACTTCAGCAAAAGACTGAAGAGTTCAGGGAGGTTGATTGTTGGATCTATGGTTAATTGCATTATTTAGAAATGATAATTGTAGATCATATTTATATTGATAAAAAATAGTGTCGAGTACTTTGAATTTTGAATGGATCTAGATTTAGGAATTTAATGACTTTTACTCTGCTTGTCATCATAGGATTTGAAGCGATAACACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAGTGGAACCAAAACATACAGAAAGGCGAGAATGAGATGGACGTCGAGGAGGAAATCATTCAAAACGCTGCTGAAATCATGGGGAAAATCACCTTCGGCAGCATCAACGACGAAGATGGGAAAACTTTGCTACAAAAACTACAAGAAGTGCAAGCAAGGCTCTTCAAAACGAATCGTTTAGTTGGAGTGCCTTTTAGCGGATACGTCCACGACCCGAAAGCGGAGAGGGAGACCAAAAGGCTTGGCAAGGAAATAGACTGGCTCGTGCACTCCCTTATCGATTCCAGAACCGTTCATCATGGTCTTTTGGGTCTACTTCTTGCGGGCAAGGAAGTTGATAGTGCATGTAGCAAGTTGAGTAGGGAGGAGTTAGTTGATGAATGCAAAACTTTCTTTTTTGCTGGTCATGAGACCACCGCTTTGGCGCTTACGTGGACATTGCTCATGCTTGCTTTGTATCCGAAATGGCAAGATGTTCTTAGAAAGGAGATTGATGAGGTTTGCCATGGAGAAGCCCTTGATGCCACCATGCTTCCTAAACTCAAACAAGTAAGTGATTATCATCTACTTTCTTAATTATCACTCGTTCTTTGTAAATATACTAACCAATGATGCACTTCTGTAAAGGTGAATATGTTTAAATGCTCTTATACCATACAGAAATCTTCTATCCTGTATTATACGTCCTTATGTACTTCATTAAAAAATTTGGTTGATAATAACGATTTCATTTATAAGTGGAACACACTACTGTGGAGACGATAGGGAGTTTGAGCTAAGAAAATAAACTTCCATTGAAAGGATAAGCTTTAGATTAATTATTTTGTGGAACTAGAAATTAATCCAGTGATCTATTTGTGTTACCTTTCAATAACTTACTGAGCTATAGTGATGTCATATCTGCTCTGATTAAAACAAGAGCTGATGATCCTATATATACACATATAGCTAATTCTAACTGTAATCGTGGACAATAATAAATTGCAGATGGACTTGGTGTTGAACGAAGTTCTAAGACTATATGGTCCAGCGCCAAACGCGCAAAGGCAAGCTCGAGAAGACGTGCAAGTAGGAAACATAGTGATTCCAAAGGGCACAAACATGTGGATAGACACTGTGGCGATGCACCACGAAGAGTCACTCTGGGGACGCGACGTCTACGAATTCAAACCCCAAAGGTTCAACACGACCGGTTCGCATGGTGCATGCAAGCATCGGTTGGGGTTCGCGCCCTTCGGGTTTGGAACCCGGCTCTGCATAGGCAAAAACCTTACCATTGTCGAGTACAAGATTGTGTTGAGTGGCATTATCAGGAGGTATGGGTTGAGTGTTTCTGAAAAGTACGTGCATTCTCCTAAGATCATGCTTACTCTTCGGCCTTCTCATGGAGTGCAGTTGGTCCTTCACCCACTATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261269.1	6.6e-107	cytokinin hydroxylase
Swissprot	Q9ZW95.1	2.8e-62	Cytochrome P450 35A2
trEMBL	A0A5P1FSG6	4.7e-107	Cytokinin hydroxylase-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G52400.1	50.29	2e-95	345	CYP715A1	cytochrome P450, family 715, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g290173	AT5G52400.1	348	158	5	12	351	179	519	50.29	2e-95	345
g290173	AT1G67110.1	312	171	6	49	351	205	510	40.38	5e-54	208
g290173	AT5G24910.1	352	204	9	11	344	183	525	34.38	3e-53	206

Ortholog group

Species	Genes
Allium cepa	g290173.t1
Allium fistulosum	AfisC2G00028
Allium sativum	Asa4G04137.1
Arabidopsis thaliana	AT5G52400.1
Oryza sativa	LOC_Os02g57810.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	27	332	192.0	1.4e-56

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0008150	P	biological_process
GO:0008202	P	steroid metabolic process
GO:0008395	F	steroid hydroxylase activity
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009741	P	response to brassinosteroid
GO:0010033	P	response to organic substance
GO:0010268	P	brassinosteroid homeostasis
GO:0010817	P	regulation of hormone levels
GO:0014070	P	response to organic cyclic compound
GO:0016128	P	phytosteroid metabolic process
GO:0016131	P	brassinosteroid metabolic process
GO:0033993	P	response to lipid
GO:0042221	P	response to chemical
GO:0042445	P	hormone metabolic process
GO:0042592	P	homeostatic process
GO:0044238	P	primary metabolic process
GO:0048878	P	chemical homeostasis
GO:0050896	P	response to stimulus
GO:0055088	P	lipid homeostasis
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:1901360	P	organic cyclic compound metabolic process
GO:1901615	P	organic hydroxy compound metabolic process
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07426	CYP4B1; cytochrome P450 family 4 subfamily B polypeptide 1	EC:1.14.14.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network